RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 AGFG1P52594 562 aaKnown RBP12.79□□□□□ -0.36
COMMD4-205ENST00000562310 BLVRAP53004 296 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 H3F3AP84243 136 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 C19orf57Q0VDD7 668 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 POU4F3Q15319 338 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 HBMQ6B0K9 141 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 TMEM225Q6GV28 225 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 DNM1P34Q6PK57 102 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-205ENST00000562310 GGNQ86UU5 652 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 EXD3Q8N9H8 876 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 OR51G2Q8NGK0 314 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 ZNF420Q8TAQ5 688 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-205ENST00000562310 RELTQ969Z4 430 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 ADAD1Q96M93 576 aaKnown RBP12.79□□□□□ -0.36
COMMD4-205ENST00000562310 MYCBPQ99417 103 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-205ENST00000562310 CNN2Q99439 309 aaKnown RBP12.79□□□□□ -0.36
COMMD4-205ENST00000562310 ALG12Q9BV10 488 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 MFRPQ9BY79 579 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 RPRD1BQ9NQG5 326 aaKnown RBP12.79□□□□□ -0.36
COMMD4-205ENST00000562310 B3GAT1Q9P2W7 334 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 FKBP7Q9Y680 259 aa12.79□□□□□ -0.36
COMMD4-205ENST00000562310 CENPBD1B2RD01 187 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 J3QRE1 110 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 ZNF701M0R085 212 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-205ENST00000562310 EIF1AYO14602 144 aaKnown RBP12.78□□□□□ -0.36
COMMD4-205ENST00000562310 TNFSF11O14788 317 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 INMTO95050 263 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 ACTL6AO96019 429 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 PTHP01270 115 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 LCKP06239 509 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 SBK2P0C263 348 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 NR2C1P13056 603 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 IFNGR1P15260 489 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 ZNF43P17038 809 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 CRABP1P29762 137 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 RFC3P40938 356 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 CAPZA2P47755 286 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 GP2P55259 537 aaKnown RBP12.78□□□□□ -0.36
COMMD4-205ENST00000562310 SLC10A1Q14973 349 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 BCL2A1Q16548 175 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 TIGD6Q17RP2 521 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 EEF1A1P5Q5VTE0 462 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 MEIOBQ8N635 442 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 ACBD7Q8N6N7 88 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 NANOGP1Q8N7R0 232 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 OR4F15Q8NGB8 312 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 FNDC8Q8TC99 324 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 ZPLD1Q8TCW7 415 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 CPNE4Q96A23 557 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-205ENST00000562310 TMIGD2Q96BF3 282 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 DGCR14Q96DF8 476 aaKnown RBP12.78□□□□□ -0.36
COMMD4-205ENST00000562310 MRPL48Q96GC5 212 aaKnown RBP12.78□□□□□ -0.36
COMMD4-205ENST00000562310 ADGRG7Q96K78 797 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 COG8Q96MW5 612 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
COMMD4-205ENST00000562310 ADGRL4Q9HBW9 690 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 ASB6Q9NWX5 421 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-205ENST00000562310 WDFY3Q8IZQ1 3526 aa12.78□□□□□ -0.36
COMMD4-205ENST00000562310 BAHCC1Q9P281 2608 aa12.77□□□□□ -0.36
COMMD4-205ENST00000562310 SLC22A23A1A5C7 686 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 CCDC160A6NGH7 325 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 MKRN2OSH3BPM6 223 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 TRAF3IP2O43734 574 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 AKAP8O43823 692 aaKnown RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 TRMUO75648 421 aaKnown RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 GYPBP06028 91 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 CLUP10909 449 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 HLA-DOBP13765 273 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 ENPP1P22413 925 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 WNT4P56705 351 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 CLDN20P56880 219 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 CARD18P57730 90 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 RPS3AP61247 264 aaKnown RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 MELKQ14680 651 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 FOXB2Q5VYV0 432 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 LRRC69Q6ZNQ3 347 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 ZBTB46Q86UZ6 589 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 CLVS1Q8IUQ0 354 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 KLHL36Q8N4N3 616 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 OR6K6Q8NGW6 343 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 OR52N1Q8NH53 320 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 ZMYND19Q96E35 227 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 CNTNAP3BQ96NU0 1288 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 KCNK17Q96T54 332 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 MNTQ99583 582 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 BCL7BQ9BQE9 202 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 CNTNAP3Q9BZ76 1288 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 TSPAN10Q9H1Z9 355 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 SYT4Q9H2B2 425 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 SLC6A15Q9H2J7 730 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 ZDHHC11Q9H8X9 412 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 ISYNA1Q9NPH2 558 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 TAS2R16Q9NYV7 291 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 RSL24D1Q9UHA3 163 aaKnown RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 LSM2Q9Y333 95 aaKnown RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 CEPT1Q9Y6K0 416 aa12.77□□□□□ -0.37
COMMD4-205ENST00000562310 TNRC6AQ8NDV7 1962 aaKnown RBP12.77□□□□□ -0.37
COMMD4-205ENST00000562310 ACACBO00763 2458 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms