RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	NYNRIN	Q9P2P1	1898 aa	Known RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	FEZF1	A0PJY2	475 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	TMEM213	A2RRL7	107 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	FBLL1	A6NHQ2	334 aa	Known RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	IFITM10	A6NMD0	228 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	RNASEK-C17orf49	H0YIS7	233 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	TOX3	O15405	576 aa	Predicted RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	NBR2	O15453	112 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	B4GAT1	O43505	415 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR1F1	O43749	312 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	TIMM8A	O60220	97 aa	Predicted RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PRAF2	O60831	178 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	GRAP2	O75791	330 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	LSM8	O95777	96 aa	Known RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	GOT2	P00505	430 aa	Known RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	FABP1	P07148	127 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PROS1	P07225	676 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR4E1	P0C645	316 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	IGHV4-38-2	P0DP08	117 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	LIF	P15018	202 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	ACADS	P16219	412 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	M6PR	P20645	277 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	BCKDHB	P21953	392 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PCMT1	P22061	227 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	UQCRC2	P22695	453 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	CEACAM8	P31997	349 aa	Predicted RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	CD70	P32970	193 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	NUP107	P57740	925 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	ARF6	P62330	175 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	RPS24	P62847	133 aa	Known RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZNF415	Q09FC8	603 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	NAB1	Q13506	487 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	EXT1	Q16394	746 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PHKG1	Q16816	387 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PPP1R3A	Q16821	1122 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	MICB	Q29980	383 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	C5orf64	Q2M2E5	130 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	YIF1B	Q5BJH7	314 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	MS4A13	Q5J8X5	152 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	TCHHL1	Q5QJ38	904 aa	Predicted RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	C6orf183	Q5T699	404 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC35E4	Q6ICL7	350 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	RBMS3	Q6XE24	437 aa	Known RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	LRRC74B	Q6ZQY2	392 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	SH2D5	Q6ZV89	423 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PID1	Q7Z2X4	250 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	DEFB106A	Q8N104	65 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	CIART	Q8N365	385 aa	Predicted RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	SYT14	Q8NB59	555 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	C19orf18	Q8NEA5	215 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PROKR2	Q8NFJ6	384 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR7G2	Q8NG99	324 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR4K1	Q8NGD4	311 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR6Q1	Q8NGQ2	317 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR10Z1	Q8NGY1	313 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	ST8SIA1	Q92185	356 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PROX1	Q92786	737 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	GGH	Q92820	318 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	MCHR2	Q969V1	340 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PPP1R16A	Q96I34	528 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	GPR137	Q96N19	417 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	VPS35	Q96QK1	796 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	XPO6	Q96QU8	1125 aa	Known RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	ERGIC2	Q96RQ1	377 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC30A2	Q9BRI3	323 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	SYT11	Q9BT88	431 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC2A11	Q9BYW1	496 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	ROGDI	Q9GZN7	287 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR2AG1	Q9H205	316 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	MMP28	Q9H239	520 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC38A1	Q9H2H9	487 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	ARRDC1-AS1	Q9H2J1	176 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	POPDC2	Q9HBU9	364 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	MCCC2	Q9HCC0	563 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	RRAGD	Q9NQL2	400 aa	Predicted RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PLCXD1	Q9NUJ7	323 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	SMOX	Q9NWM0	555 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PIPOX	Q9P0Z9	390 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	THAP10	Q9P2Z0	257 aa	Predicted RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	COPS7A	Q9UBW8	275 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	FLVCR2	Q9UPI3	526 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	AP3M1	Q9Y2T2	418 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	CSDC2	Q9Y534	153 aa	Known RBP	3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	MYH10	P35580	1976 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	SPTBN4	Q9H254	2564 aa		3.56	□□□□□ -1.84
LRRC28-222	ENST00000561431	PCDH15	Q96QU1	1955 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	PPIAL4E	A0A075B759	164 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	LOC105371242	A0A075B767	164 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	IGHV1OR15-9	A0A0B4J2B8	117 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	LOC101059948	A0A1B0GTJ6	334 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	SMCO3	A2RU48	225 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	FUOM	A2VDF0	154 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	SMIM23	A6NLE4	172 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431		A8MU76	341 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	SMIM1	B2RUZ4	78 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	C10orf142	B7Z368	130 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	FAM72C	H0Y354	149 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	PRAMEF26	H0Y7S4	382 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	MKRN2OS	H3BPM6	223 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	KMO	O15229	486 aa		3.55	□□□□□ -1.84

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