RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PLPP3O14495 311 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 EFNA2O43921 213 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 NOL3O60936 208 aaKnown RBP6.75□□□□□ -1.33
TPM1-231ENST00000561395 TRMUO75648 421 aaKnown RBP6.75□□□□□ -1.33
TPM1-231ENST00000561395 APOL3O95236 402 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 IGHMP01871 453 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 IGHA1P01876 353 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 F13BP05160 661 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 IMPDH2P12268 514 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ZNF17P17021 662 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 IL11P20809 199 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ITGA3P26006 1051 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 DPP4P27487 766 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 SDHAP31040 664 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 IDUAP35475 653 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 TGFBR2P37173 567 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 CYB561P49447 251 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ETV1P50549 477 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 RRADP55042 308 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 DSCR4P56555 118 aaPredicted RBP6.75□□□□□ -1.33
TPM1-231ENST00000561395 CTXN1P60606 82 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 SELENBP1Q13228 472 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 TIGD6Q17RP2 521 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.75□□□□□ -1.339e-6■■■■□ 24.9
TPM1-231ENST00000561395 ABHD17BQ5VST6 288 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 GPR139Q6DWJ6 353 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 TUBA3EQ6PEY2 450 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 SLC16A12Q6ZSM3 486 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 SHFQ7M4L6 423 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ZNF227Q86WZ6 799 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ANKRD13BQ86YJ7 626 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ALDH16A1Q8IZ83 802 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 SCAIQ8N9R8 606 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 Q8NA96 180 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 CYB561A3Q8NBI2 242 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 CLEC1AQ8NC01 280 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 PSD4Q8NDX1 1056 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 SDR9C7Q8NEX9 313 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 PROKR2Q8NFJ6 384 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 OR4K13Q8NH42 304 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 MFSD8Q8NHS3 518 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ZNF417Q8TAU3 575 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 RAB2BQ8WUD1 216 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 SLC25A43Q8WUT9 341 aaPredicted RBP6.75□□□□□ -1.33
TPM1-231ENST00000561395 PTP4A1Q93096 173 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 C12orf43Q96C57 262 aaKnown RBP6.75□□□□□ -1.33
TPM1-231ENST00000561395 SLC25A36Q96CQ1 311 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 NMD3Q96D46 503 aaKnown RBP6.75□□□□□ -1.33
TPM1-231ENST00000561395 DNAJA3Q96EY1 480 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 Q96M85 177 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 COG8Q96MW5 612 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 TSPAN32Q96QS1 320 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 OR5M11Q96RB7 305 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ZNF587Q96SQ5 575 aaPredicted RBP6.75□□□□□ -1.33
TPM1-231ENST00000561395 DDOQ99489 341 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 FUNDC2Q9BWH2 189 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 MND1Q9BWT6 205 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 JAM3Q9BX67 310 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 NMNAT2Q9BZQ4 307 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 RACGAP1Q9H0H5 632 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 TIMMDC1Q9NPL8 285 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 SERINC1Q9NRX5 453 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ALKBH4Q9NXW9 302 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 PTTG2Q9NZH5 202 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 H2AFY2Q9P0M6 372 aaPredicted RBP6.75□□□□□ -1.33
TPM1-231ENST00000561395 SEC14L4Q9UDX3 406 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 CLEC2DQ9UHP7 191 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ENPP5Q9UJA9 477 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 DKKL1Q9UK85 242 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ITGB1BP2Q9UKP3 347 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 ERGIC3Q9Y282 383 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 CORINQ9Y5Q5 1042 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 NCKAP5O14513 1909 aa6.75□□□□□ -1.33
TPM1-231ENST00000561395 TMEM129A0AVI4 362 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 NPIPB13A6NJU9 1138 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 NPIPB4C9JG80 1138 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 C11orf98E9PRG8 122 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 H3BML4 177 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 CDK2AP1O14519 115 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 MYL12BO14950 172 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 RNF13O43567 381 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 ZIC3O60481 467 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 CBR3O75828 277 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 NEURL1O76050 574 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 GABARAPO95166 117 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 LIMS3P0CW19 117 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 LIMS4P0CW20 117 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 TFPIP10646 304 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 CLUP10909 449 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 SPI1P17947 270 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 MYL12AP19105 171 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 TCEA1P23193 301 aaKnown RBP6.74□□□□□ -1.33
TPM1-231ENST00000561395 FKBP2P26885 142 aaKnown RBP6.74□□□□□ -1.33
TPM1-231ENST00000561395 GTF2E2P29084 291 aaKnown RBP6.74□□□□□ -1.33
TPM1-231ENST00000561395 GSTT1P30711 240 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 LIPAP38571 399 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 CD96P40200 585 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 CDKN2AP42771 156 aaKnown RBP6.74□□□□□ -1.33
TPM1-231ENST00000561395 DNASE1L1P49184 302 aa6.74□□□□□ -1.33
TPM1-231ENST00000561395 CLK1P49759 484 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms