RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ZNF837Q96EG3 531 aaPredicted RBP8.88□□□□□ -0.99
HERC1-212ENST00000561348 CLPTM1LQ96KA5 538 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 LRGUKQ96M69 825 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 MUS81Q96NY9 551 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 KCNS3Q9BQ31 491 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 USB1Q9BQ65 265 aaKnown RBP8.88□□□□□ -0.99
HERC1-212ENST00000561348 NMNAT1Q9HAN9 279 aaPredicted RBP8.88□□□□□ -0.99
HERC1-212ENST00000561348 SLC17A5Q9NRA2 495 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 INIPQ9NRY2 104 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 NPAP1Q9NZP6 1156 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 CD300AQ9UGN4 299 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 RCE1Q9Y256 329 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 AMDHD2Q9Y303 409 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 ATP23Q9Y6H3 246 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 CCDC168Q8NDH2 2452 aa8.88□□□□□ -0.99
HERC1-212ENST00000561348 A0A087WUU8 490 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 GYG2O15488 501 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 ZNF432O94892 652 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 GOSR1O95249 250 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 GADD45GO95257 159 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 FABP3P05413 133 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 ASAH2BP0C7U1 165 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 T-ENOLP0DO92 83 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 B4GALT1P15291 398 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 ITGA2P17301 1181 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 RHCEP18577 417 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 MAKP20794 623 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 ERFP50548 548 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 VLDLRP98155 873 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 SPOCK1Q08629 439 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 CD47Q08722 323 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 ALG10Q5BKT4 473 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 PODNL1Q6PEZ8 512 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 ZNF813Q6ZN06 617 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 DHFR2Q86XF0 187 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 WDFY1Q8IWB7 410 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 C20orf196Q8IYI0 205 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 WDR31Q8NA23 367 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 ACOT11Q8WXI4 607 aaPredicted RBP8.87□□□□□ -0.99
HERC1-212ENST00000561348 HTRA1Q92743 480 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 GTPBP3Q969Y2 492 aaKnown RBP8.87□□□□□ -0.99
HERC1-212ENST00000561348 PERPQ96FX8 193 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 FAM46AQ96IP4 442 aaKnown RBP8.87□□□□□ -0.99
HERC1-212ENST00000561348 TNFRSF13CQ96RJ3 184 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 PIP5K1AQ99755 562 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 ZNF426Q9BUY5 554 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 RERGLQ9H628 205 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 GORASP2Q9H8Y8 452 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 NDUFAF4Q9P032 175 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 AURKCQ9UQB9 309 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 LAMP3Q9UQV4 416 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 SLC25A15Q9Y619 301 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 HEATR1Q9H583 2144 aaKnown RBP8.87□□□□□ -0.99
HERC1-212ENST00000561348 ROS1P08922 2347 aa8.87□□□□□ -0.99
HERC1-212ENST00000561348 HRNRQ86YZ3 2850 aaPredicted RBP8.87□□□□□ -0.99
HERC1-212ENST00000561348 ALPK2Q86TB3 2170 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 TRBV4-1A0A0J9YWV2 114 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 LOC102725191A0A1B0GVB3 256 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 PDLIM1O00151 329 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 HS3ST1O14792 307 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 SMPD2O60906 423 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 ATE1O95260 518 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 QDPRP09417 244 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 ATP6V1B2P21281 511 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 PTAFRP25105 342 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 CD40P25942 277 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 SLC9A3P48764 834 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 IDH3GP51553 393 aaPredicted RBP8.86□□□□□ -0.99
HERC1-212ENST00000561348 CDH11P55287 796 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 CTXN1P60606 82 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 CBX1P83916 185 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 DEFB113Q30KQ7 82 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 ANKRD16Q6P6B7 361 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 VHLLQ6RSH7 139 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 MBOAT2Q6ZWT7 520 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 ZDHHC21Q8IVQ6 265 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 TMEM123Q8N131 208 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 C1orf162Q8NEQ5 155 aaPredicted RBP8.86□□□□□ -0.99
HERC1-212ENST00000561348 TMEM171Q8WVE6 324 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 NSMAFQ92636 917 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 BCL2L2Q92843 193 aaPredicted RBP8.86□□□□□ -0.99
HERC1-212ENST00000561348 FBXW5Q969U6 566 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 ZNF347Q96SE7 839 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 LINC00470Q9BZP3 86 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 MAN2C1Q9NTJ4 1040 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 TAS2R1Q9NYW7 299 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 CISD1Q9NZ45 108 aaKnown RBP8.86□□□□□ -0.99
HERC1-212ENST00000561348 IL20RAQ9UHF4 553 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 TMCC3Q9ULS5 477 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 MOKQ9UQ07 419 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 MAGED1Q9Y5V3 778 aaPredicted RBP8.86□□□□□ -0.99
HERC1-212ENST00000561348 PDZD2O15018 2839 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 CSMD1Q96PZ7 3565 aa8.86□□□□□ -0.99
HERC1-212ENST00000561348 DSCAMO60469 2012 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 MYO9AB2RTY4 2548 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 ZNF99A8MXY4 864 aaPredicted RBP8.85□□□□□ -0.99
HERC1-212ENST00000561348 OR10H3O60404 316 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 IGHG1P01857 330 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 HLA-HP01893 362 aa8.85□□□□□ -0.99
HERC1-212ENST00000561348 PATE4P0C8F1 98 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms