RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZNF704Q6ZNC4 412 aaPredicted RBP12.16□□□□□ -0.46
TPM1-230ENST00000561266 MBOAT2Q6ZWT7 520 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 HIST3H2AQ7L7L0 130 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 IGFN1Q86VF2 1251 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 OR13C2Q8NGS9 318 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 HTRA1Q92743 480 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 HIST1H2ACQ93077 130 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 TMEM54Q969K7 222 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 BOD1Q96IK1 185 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 SEPHS2Q99611 448 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 SEC61A2Q9H9S3 476 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 CRLF2Q9HC73 371 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 IGKV1D-43A0A0B4J1Z2 117 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 A0A1W2PRQ8 180 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 SHISA9B4DS77 424 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 CLOCKO15516 846 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 GMNNO75496 209 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 CD53P19397 219 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 LIMS1P48059 325 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 FXYD6P3P58550 94 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 RPS4XP62701 263 aaKnown RBP12.15□□□□□ -0.46
TPM1-230ENST00000561266 BNIP1Q12981 228 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 DGCR6Q14129 220 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 TESK1Q15569 626 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 ARMC4Q5T2S8 1044 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 MYPOPQ86VE0 399 aaPredicted RBP12.15□□□□□ -0.46
TPM1-230ENST00000561266 P2RY8Q86VZ1 359 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 ZDHHC21Q8IVQ6 265 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 GPR137CQ8N3F9 429 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 CLDN22Q8N7P3 220 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 C1orf162Q8NEQ5 155 aaPredicted RBP12.15□□□□□ -0.46
TPM1-230ENST00000561266 ANKK1Q8NFD2 765 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 KBTBD8Q8NFY9 601 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 OR51A7Q8NH64 312 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 OR6X1Q8NH79 312 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 ASB10Q8WXI3 467 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 CCDC124Q96CT7 223 aaKnown RBP12.15□□□□□ -0.46
TPM1-230ENST00000561266 FAM46AQ96IP4 442 aaKnown RBP12.15□□□□□ -0.46
TPM1-230ENST00000561266 PIP5K1AQ99755 562 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 UBTD1Q9HAC8 227 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 IL1RAPQ9NPH3 570 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 VNN3Q9NY84 501 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 PRPF19Q9UMS4 504 aaKnown RBP12.15□□□□□ -0.46
TPM1-230ENST00000561266 HIF3AQ9Y2N7 669 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 USF3Q68DE3 2245 aa12.15□□□□□ -0.46
TPM1-230ENST00000561266 ARID1AO14497 2285 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 SH3PXD2BA1X283 911 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 EFCAB9A8MZ26 197 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 PTP4A3O75365 173 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 TRMUO75648 421 aaKnown RBP12.14□□□□□ -0.47
TPM1-230ENST00000561266 PGA4P0DJD7 388 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 PGA3P0DJD8 388 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 MYBPC1Q00872 1141 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 PPP1R8Q12972 351 aaKnown RBP12.14□□□□□ -0.47
TPM1-230ENST00000561266 ACKR1Q16570 336 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 FGD3Q5JSP0 725 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 HMBOX1Q6NT76 420 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 ADAM5Q6NVV9 412 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 TMPRSS11FQ6ZWK6 438 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 CYP4Z1Q86W10 505 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 DHFR2Q86XF0 187 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 RNF113BQ8IZP6 322 aaKnown RBP12.14□□□□□ -0.47
TPM1-230ENST00000561266 ARHGAP24Q8N264 748 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 OR4K5Q8NGD3 323 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 FGFBP3Q8TAT2 258 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 IGFBPL1Q8WX77 278 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 HDAC2Q92769 488 aaKnown RBP12.14□□□□□ -0.47
TPM1-230ENST00000561266 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 LRR1Q96L50 414 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 ZNF347Q96SE7 839 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 USB1Q9BQ65 265 aaKnown RBP12.14□□□□□ -0.47
TPM1-230ENST00000561266 CADM1Q9BY67 442 aaKnown RBP12.14□□□□□ -0.47
TPM1-230ENST00000561266 MRPL13Q9BYD1 178 aaKnown RBP12.14□□□□□ -0.47
TPM1-230ENST00000561266 ANKRD19PQ9H560 264 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 NOX3Q9HBY0 568 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 INIPQ9NRY2 104 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 ZNF224Q9NZL3 707 aa12.14□□□□□ -0.47
TPM1-230ENST00000561266 FAM32AQ9Y421 112 aaKnown RBP12.14□□□□□ -0.47
TPM1-230ENST00000561266 CELSR1Q9NYQ6 3014 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 OR6C65A6NJZ3 312 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 ZNF726A6NNF4 738 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 MCIDASD6RGH6 385 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 M0R1B8 84 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 BCL10O95999 233 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 FABP3P05413 133 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 CELA3BP08861 270 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 RRM2P31350 389 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 MAGEA2P43356 314 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 SPIBQ01892 262 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 HIST3H3Q16695 136 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 ANKRD16Q6P6B7 361 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 B3GLCTQ6Y288 498 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 THSD4Q6ZMP0 1018 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 PIWIL3Q7Z3Z3 882 aaKnown RBP12.13□□□□□ -0.47
TPM1-230ENST00000561266 ABHD12BQ7Z5M8 362 aaPredicted RBP12.13□□□□□ -0.47
TPM1-230ENST00000561266 ZER1Q7Z7L7 766 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 SYT14Q8NB59 555 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 OR6N1Q8NGY5 312 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms