RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	FAM3C	Q92520	227 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	PEX13	Q92968	403 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	CIDEC	Q96AQ7	238 aa	Predicted RBP	3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	DCPS	Q96C86	337 aa	Known RBP	3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	C12orf66	Q96MD2	445 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	RPRD1A	Q96P16	312 aa	Predicted RBP	3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	CYP2S1	Q96SQ9	504 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	RIT2	Q99578	217 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	BCL7B	Q9BQE9	202 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	CENPK	Q9BS16	269 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	NAT10	Q9H0A0	1025 aa	Known RBP	3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	PPDPF	Q9H3Y8	114 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	XKR8	Q9H6D3	395 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	FN3KRP	Q9HA64	309 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	DIABLO	Q9NR28	239 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	TNFRSF19	Q9NS68	423 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	ETNK2	Q9NVF9	386 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	RMND1	Q9NWS8	449 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	CLEC4E	Q9ULY5	219 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	CLEC4A	Q9UMR7	237 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	TIMM22	Q9Y584	194 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	COMMD3-BMI1	R4GMX3	469 aa		3.98	□□□□□ -1.77
TCF12-223	ENST00000561235	OR5K4	A6NMS3	321 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	CENPBD1	B2RD01	187 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	HMGN1	P05114	100 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	PGC	P20142	388 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	CFL1	P23528	166 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	LONP1	P36776	959 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	RPL29	P47914	159 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	MRPS11	P82912	194 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	OTUD4	Q01804	1114 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	CSTF1	Q05048	431 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	GNA13	Q14344	377 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	SYPL1	Q16563	259 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	EXOC3L2	Q2M3D2	409 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	FBXO48	Q5FWF7	155 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	PAGE2B	Q5JRK9	111 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	LCE3C	Q5T5A8	94 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	CCNJ	Q5T5M9	372 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	FAHD2B	Q6P2I3	314 aa	Predicted RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	TMCO2	Q7Z6W1	182 aa	Predicted RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	BIVM	Q86UB2	503 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	SLC38A6	Q8IZM9	456 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	ANGPTL6	Q8NI99	470 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	SLC22A8	Q8TCC7	542 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	FAF2	Q96CS3	445 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	C19orf60	Q96EN9	201 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	FAHD2A	Q96GK7	314 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	CELF6	Q96J87	481 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	KIR2DL4	Q99706	377 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	NXF5	Q9H1B4	397 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	GLIPR2	Q9H4G4	154 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	METTL7A	Q9H8H3	244 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	C8orf4	Q9NR00	106 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	WRAP73	Q9P2S5	460 aa	Predicted RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	APOBEC3B	Q9UH17	382 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	KLHL21	Q9UJP4	597 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	ZNF221	Q9UK13	617 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	VANGL2	Q9ULK5	521 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	MRPS33	Q9Y291	106 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	CBY1	Q9Y3M2	126 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	FAM32A	Q9Y421	112 aa	Known RBP	3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	WDR45	Q9Y484	360 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	FLVCR1	Q9Y5Y0	555 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	ALG6	Q9Y672	507 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	LAMB2	P55268	1798 aa		3.97	□□□□□ -1.77
TCF12-223	ENST00000561235	EDC4	Q6P2E9	1401 aa	Known RBP	3.96	□□□□□ -1.77
TCF12-223	ENST00000561235	ZFHX4	Q86UP3	3567 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	LOC100131303	A0A0U1RQF7	123 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	SERTM2	A0A1B0GWG4	89 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	HELT	A6NFD8	242 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	NDUFS8	O00217	210 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	WRB	O00258	174 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	HIP1	O00291	1037 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	OR7A17	O14581	309 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	SNN	O75324	88 aa	Predicted RBP	3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	CTAG2	O75638	210 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	CABYR	O75952	493 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	SERPINA3	P01011	423 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	IGKV3-15	P01624	115 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	UQCRFS1P1	P0C7P4	283 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	STAG3L3	P0CL85	134 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	SLC2A3	P11169	496 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	HNF1A	P20823	631 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	VDAC1	P21796	283 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	PRKACB	P22694	351 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	ANXA13	P27216	316 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	OR3A4P	P47883	348 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	PLTP	P55058	493 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	PRMT2	P55345	433 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	STX17	P56962	302 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	VBP1	P61758	197 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	IGLV3-21	P80748	117 aa	Predicted RBP	3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	SPAG1	Q07617	926 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	BCL2L1	Q07817	233 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	SCRN3	Q0VDG4	424 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	RAB40B	Q12829	278 aa		3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	SRSF5	Q13243	272 aa	Known RBP	3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	ITGB3BP	Q13352	177 aa	Predicted RBP	3.96	□□□□□ -1.78
TCF12-223	ENST00000561235	DOC2A	Q14183	400 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms