RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SNX18Q96RF0 628 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TUBA1CQ9BQE3 449 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TAPBPLQ9BX59 468 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 PLA2G12AQ9BZM1 189 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 OR52D1Q9H346 318 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TOR3AQ9H497 397 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 LDAHQ9H6V9 325 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TMEM185BQ9H7F4 350 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 ZNF556Q9HAH1 456 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 BCO1Q9HAY6 547 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TIGARQ9NQ88 270 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 KRT84Q9NSB2 600 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 FAM118AQ9NWS6 357 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SMPD3Q9NY59 655 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 KLHL13Q9P2N7 655 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 BAIAP2Q9UQB8 552 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 NOX1Q9Y5S8 564 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 NCKAP5O14513 1909 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 GTF3C1Q12789 2109 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 FLNCQ14315 2725 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 MPDZO75970 2070 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 TRAV27A0A087WT01 109 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 MBD3L4A6NDZ8 208 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 MBD3L3A6NE82 208 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 MBD3L5A6NJ08 208 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 NPIPA2E9PIF3 369 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 NPIPA3F8WFD2 350 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 DENRO43583 198 aaKnown RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 RAMP1O60894 148 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 WDR1O75083 606 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 AQP8O94778 261 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 AKR7A3O95154 331 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 OPN1LWP04000 364 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 HIST1H2ABP04908 130 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 HMGN1P05114 100 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 CRHP06850 196 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 IGFBP1P08833 259 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 SAGP10523 405 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 POU2F1P14859 743 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 GABRA1P14867 456 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 GABRB1P18505 474 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 CDH2P19022 906 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 ENPP1P22413 925 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 TCEA1P23193 301 aaKnown RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 SLC6A6P31641 620 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 CEACAM8P31997 349 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 NTF4P34130 210 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 GRK5P34947 590 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 TIMP3P35625 211 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 AQP2P41181 271 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 HSPA13P48723 471 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 AQP4P55087 323 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 NUP107P57740 925 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 OR2B6P58173 313 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 TEKQ02763 1124 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 PUDPQ08623 228 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 PMS2P3Q13401 168 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 IL18R1Q13478 541 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 KEAP1Q14145 624 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 PTGES3Q15185 160 aaKnown RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 RNPS1Q15287 305 aaKnown RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 SF3B4Q15427 424 aaKnown RBP eCLIP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 HIST3H3Q16695 136 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 LRRC36Q1X8D7 754 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 PGGHGQ32M88 737 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 ACSF3Q4G176 576 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 PRR30Q53SZ7 412 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 WLSQ5T9L3 541 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 TTC23Q5W5X9 447 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 FAM205BPQ63HN1 556 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 GPR139Q6DWJ6 353 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 ACSM5Q6NUN0 579 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 SLC27A4Q6P1M0 643 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 POMZP3Q6PJE2 187 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 SEM1Q6ZVN7 128 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 CREB3L2Q70SY1 520 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 HIST3H2AQ7L7L0 130 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 MEX3DQ86XN8 651 aaKnown RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 DOLPP1Q86YN1 238 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 CCDC103Q8IW40 242 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 GALNT4Q8N4A0 578 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 FAM26EQ8N5C1 309 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 DHRSXQ8N5I4 330 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 ARIH2OSQ8N7S6 290 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 ATP6V1C2Q8NEY4 427 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 OR9K2Q8NGE7 335 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 OR4Q3Q8NH05 313 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 OR51A7Q8NH64 312 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 RHOXF1Q8NHV9 184 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 MBD3L2Q8NHZ7 208 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 ZNF519Q8TB69 540 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 HIST1H2ACQ93077 130 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 TMEM45BQ96B21 275 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 SLC25A36Q96CQ1 311 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 ZHX1-C8orf76Q96EF9 292 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 ZNF845Q96IR2 970 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 SAMD8Q96LT4 415 aa4.86□□□□□ -1.63
ZEB1-220ENST00000560909 BBC3Q96PG8 261 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 ZNF184Q99676 751 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-220ENST00000560909 TACO1Q9BSH4 297 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms