RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 PKNOX2Q96KN3 472 aa9□□□□□ -0.97
CDC42BPB-207ENST00000560492 CCDC115Q96NT0 180 aa9□□□□□ -0.97
CDC42BPB-207ENST00000560492 OR2M2Q96R28 347 aa9□□□□□ -0.97
CDC42BPB-207ENST00000560492 ZNF587Q96SQ5 575 aaPredicted RBP9□□□□□ -0.97
CDC42BPB-207ENST00000560492 EMC6Q9BV81 110 aa9□□□□□ -0.97
CDC42BPB-207ENST00000560492 ULBP2Q9BZM5 246 aa9□□□□□ -0.97
CDC42BPB-207ENST00000560492 ZNF665Q9H7R5 613 aa9□□□□□ -0.97
CDC42BPB-207ENST00000560492 MED4Q9NPJ6 270 aa9□□□□□ -0.97
CDC42BPB-207ENST00000560492 MYEF2Q9P2K5 600 aaKnown RBP9□□□□□ -0.97
CDC42BPB-207ENST00000560492 BTNL2Q9UIR0 455 aa9□□□□□ -0.97
CDC42BPB-207ENST00000560492 GPR160Q9UJ42 338 aa9□□□□□ -0.97
CDC42BPB-207ENST00000560492 ISPDA4D126 451 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 RFXANKO14593 260 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 TMPRSS2O15393 492 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 ITM2AO43736 263 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 NCR1O76036 304 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 FAM157BP0CG42 384 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 ETFAP13804 333 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 B4GALT1P15291 398 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 FPR2P25090 351 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 GRPRP30550 384 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 MAGEB1P43366 347 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 GIPRP48546 466 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 AQP5P55064 265 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 DSTNP60981 165 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 NCALDP61601 193 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 UFM1P61960 85 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 LMO4P61968 165 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 RAB1AP62820 205 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 CCL8P80075 99 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 POU3F1Q03052 451 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 FOXL1Q12952 345 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 RAB39AQ14964 217 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 MFSD13AQ14CX5 517 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 RGS7BPQ6MZT1 257 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 SHISA2Q6UWI4 295 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 C1QL2Q7Z5L3 287 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 TREML1Q86YW5 311 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 CLIP4Q8N3C7 705 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 C10orf53Q8N6V4 93 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 SLC38A4Q969I6 547 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 NUF2Q9BZD4 464 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 DECR2Q9NUI1 292 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 SELENONQ9NZV5 590 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 TAAR3PQ9P1P4 343 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 MGAM2Q2M2H8 2515 aa8.99□□□□□ -0.97
CDC42BPB-207ENST00000560492 ZNF726A6NNF4 738 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 CLDN25C9JDP6 229 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 FTCDNL1E5RQL4 147 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 RGS16O15492 202 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 PLPP2O43688 288 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 OR2T1O43869 369 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 UBL3O95164 117 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 LCKP06239 509 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 ZNF14P17017 642 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 DRD4P21917 467 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 AHCYP23526 432 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 KLF3P57682 345 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 ABCE1P61221 599 aaKnown RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 UBA52P62987 128 aaKnown RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 TEKQ02763 1124 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 ZP4Q12836 540 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 CAMK2DQ13557 499 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 PDLIM3Q53GG5 364 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 PHYHD1Q5SRE7 291 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 FAM69AQ5T7M9 428 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 RNF220Q5VTB9 566 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 C1orf229Q6ZS94 237 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 H1FNTQ75WM6 255 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 TAAR8Q969N4 342 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 TIMD4Q96H15 378 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 DUX5Q96PT3 197 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 FOXB1Q99853 325 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 GAL3ST1Q99999 423 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 PTDSS2Q9BVG9 487 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 SPATA9Q9BWV2 254 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 ROPN1BQ9BZX4 212 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 RACGAP1Q9H0H5 632 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 ZNF385DQ9H6B1 395 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 C7orf69Q9H7B7 122 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 RNF121Q9H920 327 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 ROPN1Q9HAT0 212 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 CDH20Q9HBT6 801 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 MED29Q9NX70 200 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 UBAP1Q9NZ09 502 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 B3GAT1Q9P2W7 334 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 SLC7A8Q9UHI5 535 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 IFT52Q9Y366 437 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 RAP2CQ9Y3L5 183 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 ARHGAP32A7KAX9 2087 aa8.98□□□□□ -0.97
CDC42BPB-207ENST00000560492 IGHV1-69-2A0A0G2JMI3 117 aa8.97□□□□□ -0.97
CDC42BPB-207ENST00000560492 C5orf58C9J3I9 102 aa8.97□□□□□ -0.97
CDC42BPB-207ENST00000560492 J3QLI3 93 aa8.97□□□□□ -0.97
CDC42BPB-207ENST00000560492 TRAF3IP2O43734 574 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPB-207ENST00000560492 NPIPB7O75200 414 aa8.97□□□□□ -0.97
CDC42BPB-207ENST00000560492 PRSS23O95084 383 aa8.97□□□□□ -0.97
CDC42BPB-207ENST00000560492 MT-ND5P03915 603 aa8.97□□□□□ -0.97
CDC42BPB-207ENST00000560492 SERPINE1P05121 402 aa8.97□□□□□ -0.97
CDC42BPB-207ENST00000560492 PATE4P0C8F1 98 aa8.97□□□□□ -0.97
CDC42BPB-207ENST00000560492 ZNF35P13682 527 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms