RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 FBXO17Q96EF6 278 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ADGRG7Q96K78 797 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 KLHL15Q96M94 604 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 SLC29A1Q99808 456 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 VRK1Q99986 396 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 RBM4BQ9BQ04 359 aaKnown RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 BPESC1Q9GZL8 116 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 HOXD1Q9GZZ0 328 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ANKRD19PQ9H560 264 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 REEP1Q9H902 201 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 CACYBPQ9HB71 228 aaKnown RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 GP6Q9HCN6 339 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 NPAP1Q9NZP6 1156 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 PCDHB10Q9UN67 800 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF443Q9Y2A4 671 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF281Q9Y2X9 895 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 SH3GLB1Q9Y371 365 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 FAM32AQ9Y421 112 aaKnown RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 CHST2Q9Y4C5 530 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 LYVE1Q9Y5Y7 322 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 NPIPA5A0A0B4J1W7 369 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 A0A0J9YW62 118 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 C7orf72A4D263 438 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 LRP5LA4QPB2 252 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 CDHR4A6H8M9 788 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 OR5H1A6NKK0 313 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 GJE1A6NN92 205 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 NPIPA7E9PJI5 369 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 H0YAE9 185 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 hCG_2039718K7EN88 272 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 EI24O14681 340 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 TMPRSS2O15393 492 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 NME6O75414 186 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-215ENST00000560424 RAD51DO75771 328 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 NPIPA8P0DM63 369 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 THRBP10828 461 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 UQCRBP14927 111 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 CD40P25942 277 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 SFTPDP35247 375 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 ATP12AP54707 1039 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 SPOCK1Q08629 439 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 TAF11Q15544 211 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 AWAT1Q58HT5 328 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 SLC46A3Q7Z3Q1 461 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 PEG10Q86TG7 708 aaKnown RBP8.14□□□□□ -1.11
SMAD3-215ENST00000560424 CYP4Z1Q86W10 505 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 CARM1Q86X55 608 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 ZNF100Q8IYN0 542 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 OFCC1Q8IZS5 231 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 UBE2J2Q8N2K1 259 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 GTPBP8Q8N3Z3 284 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-215ENST00000560424 LINC00471Q8N535 108 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 PIK3C3Q8NEB9 887 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 OR52N5Q8NH56 324 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 PIK3R3Q92569 461 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 HPS1Q92902 700 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 ZG16BQ96DA0 208 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 OTUB1Q96FW1 271 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-215ENST00000560424 PRRC1Q96M27 445 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 Q9H521 79 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 SMPD3Q9NY59 655 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-215ENST00000560424 VNN3Q9NY84 501 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 FLRT3Q9NZU0 649 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 KLHL9Q9P2J3 617 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 SAMHD1Q9Y3Z3 626 aaKnown RBP8.14□□□□□ -1.11
SMAD3-215ENST00000560424 PCDHGB1Q9Y5G3 927 aa8.14□□□□□ -1.11
SMAD3-215ENST00000560424 GXYLT2A0PJZ3 443 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 SAC3D1A6NKF1 404 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 ZNF814B7Z6K7 855 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 PDLIM1O00151 329 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 FFAR1O14842 300 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 E2F6O75461 281 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 OXSR1O95747 527 aaPredicted RBP8.13□□□□□ -1.11
SMAD3-215ENST00000560424 ERCC1P07992 297 aaPredicted RBP8.13□□□□□ -1.11
SMAD3-215ENST00000560424 HPGDP15428 266 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 IL7RP16871 459 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 RRM2P31350 389 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 OR1E2P47887 323 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 OR3A2P47893 321 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 RPS6KA3P51812 740 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 MICAQ29983 383 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 TMEM44Q2T9K0 475 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 KLHL26Q53HC5 615 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 KDM4DQ6B0I6 523 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 FAHD1Q6P587 224 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 B3GLCTQ6Y288 498 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 GLCCI1Q86VQ1 547 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 COMTD1Q86VU5 262 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 SLC43A2Q8N370 569 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 LRRC17Q8N6Y2 441 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 FAM71CQ8NEG0 241 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 OR4D11Q8NGI4 311 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 OR6T1Q8NGN1 323 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 TFAP2CQ92754 450 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 SORCS2Q96PQ0 1159 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 SNX18Q96RF0 628 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 FUZQ9BT04 418 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 SOX7Q9BT81 388 aa8.13□□□□□ -1.11
SMAD3-215ENST00000560424 ANKRD60Q9BZ19 345 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms