RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NPAP1Q9NZP6 1156 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 PDP1Q9P0J1 537 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-214ENST00000560402 TMCC3Q9ULS5 477 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 U3KQV3 271 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 ATRQ13535 2644 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 A0A087WXM4 84 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 CIB4A0PJX0 185 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 A6NHS1 94 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 CD5LO43866 347 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 C1QCP02747 245 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 RRM2P31350 389 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 RPL5P46777 297 aaKnown RBP11.94□□□□□ -0.5
SMAD3-214ENST00000560402 MAP2K6P52564 334 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 ADARB1P78563 741 aaKnown RBP11.94□□□□□ -0.5
SMAD3-214ENST00000560402 MYBPC1Q00872 1141 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 FUT5Q11128 374 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 MAPK14Q16539 360 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 OR7E24Q6IFN5 339 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 TBPL2Q6SJ96 375 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 THAP5Q7Z6K1 395 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 UBE2J2Q8N2K1 259 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 C17orf78Q8N4C9 275 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 LINC00471Q8N535 108 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 C1orf162Q8NEQ5 155 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-214ENST00000560402 TSPAN14Q8NG11 270 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 ADAD1Q96M93 576 aaKnown RBP11.94□□□□□ -0.5
SMAD3-214ENST00000560402 TRNT1Q96Q11 434 aaKnown RBP11.94□□□□□ -0.5
SMAD3-214ENST00000560402 SMURF2Q9HAU4 748 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 UBAP1Q9NZ09 502 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 NDUFAF4Q9P032 175 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 TRAPPC4Q9Y296 219 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 SH3GLB1Q9Y371 365 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 HSPE1-MOB4S4R3N1 261 aa11.94□□□□□ -0.5
SMAD3-214ENST00000560402 ANK3Q12955 4377 aaKnown RBP11.94□□□□□ -0.5
SMAD3-214ENST00000560402 FBN3Q75N90 2809 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 SMIM31A0A1B0GVY4 71 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 ARRDC5A6NEK1 342 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 FAAHO00519 579 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 DLGAP1O14490 977 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 EIF1BO60739 113 aaKnown RBP11.93□□□□□ -0.5
SMAD3-214ENST00000560402 RAMP1O60894 148 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 MRPL33O75394 65 aaKnown RBP11.93□□□□□ -0.5
SMAD3-214ENST00000560402 RAD51DO75771 328 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 MFN2O95140 757 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 GADD45GO95257 159 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 CD8AP01732 235 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 EDNRAP25101 427 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 CDH12P55289 794 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 DSCR9P59020 149 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 ESRRGP62508 458 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 TUBA4AP68366 448 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 IL1RL1Q01638 556 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 ZIK1Q3SY52 487 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-214ENST00000560402 RBM48Q5RL73 367 aaKnown RBP11.93□□□□□ -0.5
SMAD3-214ENST00000560402 C11orf71Q6IPW1 123 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 USP51Q70EK9 711 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.93□□□□□ -0.5
SMAD3-214ENST00000560402 PIAS4Q8N2W9 510 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-214ENST00000560402 SMYD1Q8NB12 490 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 PMM1Q92871 262 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 ZNF775Q96BV0 537 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-214ENST00000560402 DDIT4LQ96D03 193 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 ARL5BQ96KC2 179 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 MDFIQ99750 246 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 DHRS9Q9BPW9 319 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 ARMC7Q9H6L4 198 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 EVA1AQ9H8M9 152 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 CBLN4Q9NTU7 201 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 FAM118AQ9NWS6 357 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 POU2F3Q9UKI9 436 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 ZNF232Q9UNY5 417 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 POFUT2Q9Y2G5 429 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 IFT52Q9Y366 437 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 SLC25A15Q9Y619 301 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 COL6A5A8TX70 2615 aa11.93□□□□□ -0.5
SMAD3-214ENST00000560402 DPPA5A6NC42 116 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 SLC16A6O15403 523 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 ZNF208O43345 1280 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 CCNB2O95067 398 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 IFNA2P01563 188 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 CD247P20963 164 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 TTKP33981 857 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 RYKP34925 604 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 POLR2HP52434 150 aaKnown RBP11.92□□□□□ -0.5
SMAD3-214ENST00000560402 NUDT6P53370 316 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 CRYBA2P53672 197 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 SH3BGRP55822 239 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-214ENST00000560402 SYPL1Q16563 259 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 RPS26P11Q5JNZ5 115 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-214ENST00000560402 ZNF544Q6NX49 715 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 SLC22A25Q6T423 547 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 CLEC2AQ6UVW9 174 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 OLIG3Q7RTU3 272 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 PEX5LQ8IYB4 626 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 FBXL14Q8N1E6 418 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 DEPDC4Q8N2C3 294 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 MAPK1IP1LQ8NDC0 245 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 OR10G2Q8NGC3 310 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 OR52N5Q8NH56 324 aa11.92□□□□□ -0.5
SMAD3-214ENST00000560402 RHNO1Q9BSD3 238 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms