RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 GTF2E2P29084 291 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 S100A3P33764 101 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 CLNS1AP54105 237 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 RAB39AQ14964 217 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 NKPD1Q17RQ9 610 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 PCGF3Q3KNV8 242 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 FAM69AQ5T7M9 428 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 CARD17Q5XLA6 110 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 LRRC34Q8IZ02 419 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 TRIML2Q8N7C3 387 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 SYT14Q8NB59 555 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 FGFBP3Q8TAT2 258 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 PNPT1Q8TCS8 783 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 MGARPQ8TDB4 240 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 TCP10LQ8TDR4 215 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 PANX1Q96RD7 426 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 EMC6Q9BV81 110 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 SPATA9Q9BWV2 254 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 SLITRK2Q9H156 845 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 ARMCX1Q9P291 453 aa16.81■□□□□ 0.28
RABGGTA-214ENST00000560163 DNAJC9-AS1A6NH13 148 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 RAB36O95755 333 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 SERPINA5P05154 406 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 BPGMP07738 259 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 B4GALT1P15291 398 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 H2AFXP16104 143 aaPredicted RBP16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 ZFP36P26651 326 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 GRPRP30550 384 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 IL13RA1P78552 427 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 ZNF621Q6ZSS3 439 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 ADPRHL1Q8NDY3 354 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 AENQ8WTP8 325 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 SLC38A5Q8WUX1 472 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 SLC41A3Q96GZ6 507 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 DUX5Q96PT3 197 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 FOXB1Q99853 325 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 ZMAT3Q9HA38 289 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 FBXL3Q9UKT7 428 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 POFUT2Q9Y2G5 429 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 CACNG2Q9Y698 323 aa16.8■□□□□ 0.28
RABGGTA-214ENST00000560163 IGKV1D-42A0A075B6H8 117 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 PPIAL4EA0A075B759 164 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 PPIAL4CA0A0B4J2A2 164 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 PPIAL4DF5H284 164 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 ITM2AO43736 263 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 ERLIN1O75477 346 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 UBL3O95164 117 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 PATE4P0C8F1 98 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 PPIAL4FP0DN26 164 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 RAD52P43351 418 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 HOXC5Q00444 222 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 TEKQ02763 1124 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 LARS2Q15031 903 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 RGS7BPQ6MZT1 257 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 TMEM154Q6P9G4 183 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 RBMS3Q6XE24 437 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 NET1Q7Z628 596 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 SKA3Q8IX90 412 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 PAQR4Q8N4S7 273 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 ZNF781Q8N8C0 355 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 UBLCP1Q8WVY7 318 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 TXNDC15Q96J42 360 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 C12orf10Q9HB07 376 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 SLC6A13Q9NSD5 602 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 MED29Q9NX70 200 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 CALML5Q9NZT1 146 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 P2RX2Q9UBL9 471 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 GPR160Q9UJ42 338 aa16.79■□□□□ 0.28
RABGGTA-214ENST00000560163 CLDN25C9JDP6 229 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 DYNC1I1O14576 645 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 SPAG7O75391 227 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 RNASE1P07998 156 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 IL12AP29459 219 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 CRISP3P54108 245 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 KLF3P57682 345 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 C5orf46Q6UWT4 87 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 USP51Q70EK9 711 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 RETREG3Q86VR2 466 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 UEVLDQ8IX04 471 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 DEFB108BQ8NET1 73 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 SYNPRQ8TBG9 265 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 SLC35B4Q969S0 331 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 ZNF48Q96MX3 618 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 RSPO3Q9BXY4 272 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 B3GAT2Q9NPZ5 323 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 ARGLU1Q9NWB6 273 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 ZNF69Q9UC07 566 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 ZNF232Q9UNY5 417 aa16.78■□□□□ 0.28
RABGGTA-214ENST00000560163 TRAV36DV7A0A075B6V5 113 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 SLC22A23A1A5C7 686 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 BCHEP06276 602 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 FAM157BP0CG42 384 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 ETFAP13804 333 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 SELENOVP59797 346 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 UFM1P61960 85 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 LCN2P80188 198 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 RPS26P11Q5JNZ5 115 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 KLF17Q5JT82 389 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 PIWIL3Q7Z3Z3 882 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 BCL6BQ8N143 479 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms