RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CLPPQ16740 277 aaPredicted RBP9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF627Q7L945 461 aa9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 AAED1Q7RTV5 226 aa9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 GDF7Q7Z4P5 450 aa9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF101Q8IZC7 436 aa9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 RNF113BQ8IZP6 322 aaKnown RBP9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 ZFAND1Q8TCF1 268 aa9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 EGLN3Q9H6Z9 239 aa9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 CALHM2Q9HA72 323 aa9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 B3GNT2Q9NY97 397 aa9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 TCFL5Q9UL49 500 aa9.75□□□□□ -0.85
CARMIL3-202ENST00000559694 LOC100509620A0A075B734 347 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF891A8MT65 544 aaPredicted RBP9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 PRODHO43272 600 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 SCO1O75880 301 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 NCR1O76036 304 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC22A5O76082 557 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 ITGA5P08648 1049 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 PNLIPP16233 465 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 RAB3BP20337 219 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 DBPQ10586 325 aaPredicted RBP9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 TMEM69Q5SWH9 247 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF585AQ6P3V2 769 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 GRINAQ7Z429 371 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 GALNTL5Q7Z4T8 443 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 OR8S1Q8NH09 359 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 SPACA9Q96E40 222 aaPredicted RBP9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 SEMA4CQ9C0C4 833 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC6A13Q9NSD5 602 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 CLEC2DQ9UHP7 191 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 PLEKHA6Q9Y2H5 1048 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 NTNG1Q9Y2I2 539 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 F5H0A9 414 aaPredicted RBP9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 C1QBP02746 253 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 HCKP08631 526 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 MMP11P24347 488 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 ACTC1P68032 377 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 ACTA1P68133 377 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 PSPHP78330 225 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 TSPAN31Q12999 210 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 RIN1Q13671 783 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 PRTGQ2VWP7 1150 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 HBMQ6B0K9 141 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 ANKRD37Q7Z713 158 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 NKAIN4Q8IVV8 208 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 CLDN22Q8N7P3 220 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 IL17RDQ8NFM7 739 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 OR4C3Q8NH37 302 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF436Q9C0F3 470 aaPredicted RBP9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 PLEK2Q9NYT0 353 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 SDK2Q58EX2 2172 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 MIA3Q5JRA6 1907 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 DNAJC13O75165 2243 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 A0A1W2PQM1 296 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 F5H5K5 113 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 AKR7A2O43488 359 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 GDF9O60383 454 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF780AO75290 641 aaPredicted RBP9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 RBBP9O75884 186 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 SPDEFO95238 335 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 WISP3O95389 354 aaPredicted RBP9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 RGS19P49795 217 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 RIDAP52758 137 aaKnown RBP9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 CLDN17P56750 224 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 PPIAP62937 165 aaKnown RBP9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC35A1P78382 337 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 CAMK2DQ13557 499 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 ACER2Q5QJU3 275 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC25A24Q6NUK1 477 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 UBE3DQ7Z6J8 389 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 HAVCR1Q96D42 359 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 MAP6Q96JE9 813 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 DHRS9Q9BPW9 319 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 FBXL3Q9UKT7 428 aa9.74□□□□□ -0.85
CARMIL3-202ENST00000559694 TRAV36DV7A0A075B6V5 113 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 FRG2CA6NGY1 282 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 PRR33A8MZF0 331 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC43A1O75387 559 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 GPX5O75715 221 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 THBS1P07996 1170 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CSRP3P50461 194 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CEBPGP53567 150 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 AIMP2Q13155 320 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 DUSP8Q13202 625 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 ILKQ13418 452 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CSRP2Q16527 193 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CFAP77Q6ZQR2 320 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 GPALPP1Q8IXQ4 340 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 PNLDC1Q8NA58 520 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC41A2Q96JW4 573 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 B3GNT4Q9C0J1 378 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 GREB1Q4ZG55 1949 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 KDM4EB2RXH2 506 aaPredicted RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 IGHG1P01857 330 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CSTBP04080 98 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 GZMKP49863 264 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 C1orf140Q5VVS0 124 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 NXNL2Q5VZ03 156 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 GPR139Q6DWJ6 353 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC18B1Q6NT16 456 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms