RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 NOX1Q9Y5S8 564 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 GMEB1Q9Y692 573 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 A0A0A6YYJ9 748 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 A0A0B4J2E0 115 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 A0A1B0GX12 115 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 HPXP02790 462 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 B4GALT1P15291 398 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 ACHEP22303 614 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 CBLP22681 906 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 SLC18A1P54219 525 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 GLIPR1L2Q4G1C9 344 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 LRIF1Q5T3J3 769 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 SWT1Q5T5J6 900 aaKnown RBP11.25□□□□□ -0.61
TPM1-220ENST00000559556 CARD17Q5XLA6 110 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 KRT73Q86Y46 540 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 MSRB3Q8IXL7 192 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 C10orf111Q8N326 155 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.25□□□□□ -0.61
TPM1-220ENST00000559556 CLDND2Q8NHS1 167 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 ZFAND2BQ8WV99 257 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 MOGAT1Q96PD6 335 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 EPYCQ99645 322 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 TMEM43Q9BTV4 400 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 SPATA5L1Q9BVQ7 753 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 ASPNQ9BXN1 380 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 PARD6BQ9BYG5 372 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 ULBP2Q9BZM5 246 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 MED29Q9NX70 200 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 SLC25A37Q9NYZ2 338 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 REV1Q9UBZ9 1251 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 FBXL3Q9UKT7 428 aa11.25□□□□□ -0.61
TPM1-220ENST00000559556 TPST1O60507 370 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 TFP02787 698 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 SAGP10523 405 aaPredicted RBP11.24□□□□□ -0.61
TPM1-220ENST00000559556 PPIBP23284 216 aaKnown RBP11.24□□□□□ -0.61
TPM1-220ENST00000559556 GPR6P46095 362 aaPredicted RBP11.24□□□□□ -0.61
TPM1-220ENST00000559556 PTDSS1P48651 473 aaKnown RBP11.24□□□□□ -0.61
TPM1-220ENST00000559556 RGS8P57771 180 aaPredicted RBP11.24□□□□□ -0.61
TPM1-220ENST00000559556 MRPS11P82912 194 aaKnown RBP11.24□□□□□ -0.61
TPM1-220ENST00000559556 CDK6Q00534 326 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 PIGFQ07326 219 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 CAMK2DQ13557 499 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 GCNT6Q5T4J0 391 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 PXKQ7Z7A4 578 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 LRP11Q86VZ4 500 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 CARM1Q86X55 608 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 BHLHE22Q8NFJ8 381 aaPredicted RBP11.24□□□□□ -0.61
TPM1-220ENST00000559556 MGARPQ8TDB4 240 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 RDH5Q92781 318 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 TMEM186Q96B77 213 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 ZBTB9Q96C00 473 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 TXNDC15Q96J42 360 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 FOXB1Q99853 325 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 SYT3Q9BQG1 590 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 ZNF385DQ9H6B1 395 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 EVA1AQ9H8M9 152 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 MYEF2Q9P2K5 600 aaKnown RBP11.24□□□□□ -0.61
TPM1-220ENST00000559556 SLC7A8Q9UHI5 535 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 RAB21Q9UL25 225 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 POFUT2Q9Y2G5 429 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 NOTCH1P46531 2555 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 WNK1Q9H4A3 2382 aa11.24□□□□□ -0.61
TPM1-220ENST00000559556 VWFP04275 2813 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 TRBV5-3A0A0A0MS03 114 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 FAM157AC9JC47 383 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 PLPP3O14495 311 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 TPST2O60704 377 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 RP2O75695 350 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 NCR1O76036 304 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 UBL3O95164 117 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 VENTXO95231 258 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 RAB36O95755 333 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 MSMBP08118 114 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 COL8A2P25067 703 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 ALDH3B1P43353 468 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 GIPRP48546 466 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 AQP5P55064 265 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 RAB1AP62820 205 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 GALK2Q01415 458 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 PMS2P3Q13401 168 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 OR1Q1Q15612 314 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 BLOC1S3Q6QNY0 202 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 PIWIL3Q7Z3Z3 882 aaKnown RBP11.23□□□□□ -0.61
TPM1-220ENST00000559556 ZNF584Q8IVC4 421 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 OR6N1Q8NGY5 312 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 YIPF5Q969M3 257 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 TMEM38AQ9H6F2 299 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 TMEM27Q9HBJ8 222 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 ZNF275Q9NSD4 429 aaPredicted RBP11.23□□□□□ -0.61
TPM1-220ENST00000559556 HIF1ANQ9NWT6 349 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 SELENONQ9NZV5 590 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 SLAMF8Q9P0V8 285 aa11.23□□□□□ -0.61
TPM1-220ENST00000559556 PRORSD1PA6NEY8 169 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 ZNF726A6NNF4 738 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 LRRN3E7EW58 273 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 WNT9BO14905 357 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 MT-ATP6P00846 226 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 SERPINA5P05154 406 aa11.22□□□□□ -0.61
TPM1-220ENST00000559556 TCN1P20061 433 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms