RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 UMPSP11172 480 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 IFNGR1P15260 489 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 PAX7P23759 505 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 PRDX6P30041 224 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 TTKP33981 857 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 GYS2P54840 703 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 BIDP55957 195 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 ZP4Q12836 540 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 CAMK2DQ13557 499 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 MELKQ14680 651 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 C3orf36Q3SXR2 165 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 SLC35D2Q76EJ3 337 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 VTCN1Q7Z7D3 282 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 BIVMQ86UB2 503 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 MYPOPQ86VE0 399 aaPredicted RBP9.54□□□□□ -0.88
SPG11-216ENST00000559347 DEPDC4Q8N2C3 294 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 CIARTQ8N365 385 aaPredicted RBP9.54□□□□□ -0.88
SPG11-216ENST00000559347 TMEM239Q8WW34 195 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 LZICQ8WZA0 190 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 GTPBP3Q969Y2 492 aaKnown RBP9.54□□□□□ -0.88
SPG11-216ENST00000559347 CMTM5Q96DZ9 223 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 ADAD1Q96M93 576 aaKnown RBP9.54□□□□□ -0.88
SPG11-216ENST00000559347 KATNB1Q9BVA0 655 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 ULBP2Q9BZM5 246 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 GSX1Q9H4S2 264 aaPredicted RBP9.54□□□□□ -0.88
SPG11-216ENST00000559347 SEC61A2Q9H9S3 476 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 MOV10Q9HCE1 1003 aaKnown RBP9.54□□□□□ -0.88
SPG11-216ENST00000559347 B3GAT2Q9NPZ5 323 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 C20orf141Q9NUB4 165 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 A4GNTQ9UNA3 340 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 MOKQ9UQ07 419 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 CHD3Q12873 2000 aaKnown RBP9.54□□□□□ -0.88
SPG11-216ENST00000559347 GMNCA6NCL1 334 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 RNF13O43567 381 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 OR7A10O76100 309 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 OR6A2O95222 327 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 ZNF682O95780 498 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 IGHV4-39P01824 125 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 CECR9P0C854 216 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 FUT4P22083 530 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 CSNK1A1P48729 337 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 PSME3P61289 254 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 GNGT1P63211 74 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 RPL18Q07020 188 aaKnown RBP9.53□□□□□ -0.88
SPG11-216ENST00000559347 ETFDHQ16134 617 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 AGAP6Q5VW22 663 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 ZNF544Q6NX49 715 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 CBLL1Q75N03 491 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 ZNF627Q7L945 461 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 CPLX4Q7Z7G2 160 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 OFCC1Q8IZS5 231 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 MUC15Q8N387 334 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 FAM169BQ8N8A8 192 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 OR6N1Q8NGY5 312 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 OR6X1Q8NH79 312 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 GEMIN6Q8WXD5 167 aaKnown RBP9.53□□□□□ -0.88
SPG11-216ENST00000559347 TRMT61AQ96FX7 289 aaKnown RBP9.53□□□□□ -0.88
SPG11-216ENST00000559347 HSH2DQ96JZ2 352 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 SMR3AQ99954 134 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 BDH2Q9BUT1 245 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 CACNG6Q9BXT2 260 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 SPAG4Q9NPE6 437 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 MAN2C1Q9NTJ4 1040 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 CBLN4Q9NTU7 201 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 SNX13Q9Y5W8 968 aa9.53□□□□□ -0.88
SPG11-216ENST00000559347 ZNF726A6NNF4 738 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 J3KTA2 159 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 NDUFAB1O14561 156 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 GSTA4O15217 222 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 NDUFS7O75251 213 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 SERPINA1P01009 418 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 IFNW1P05000 195 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 CELA3BP08861 270 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 TSPAN19P0C672 248 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 PGA4P0DJD7 388 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 PGA3P0DJD8 388 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 B4GALT1P15291 398 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 NCK1P16333 377 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 CALCRP30988 508 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 FABP6P51161 128 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 NAAAQ02083 359 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 ST3GAL3Q11203 375 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 IFI44LQ53G44 452 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 DMRTA1Q5VZB9 504 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 FBXL14Q8N1E6 418 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 NOXO1Q8NFA2 376 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 LIPHQ8WWY8 451 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 TMEM54Q969K7 222 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 ZDHHC16Q969W1 377 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 ZNF566Q969W8 418 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 SGTBQ96EQ0 304 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 HS6ST2Q96MM7 605 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 FOXB1Q99853 325 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 KCTD14Q9BQ13 255 aaPredicted RBP9.52□□□□□ -0.89
SPG11-216ENST00000559347 KCNS3Q9BQ31 491 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 NOX3Q9HBY0 568 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 ZNF224Q9NZL3 707 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 GDF2Q9UK05 429 aaPredicted RBP9.52□□□□□ -0.89
SPG11-216ENST00000559347 MED31Q9Y3C7 131 aa9.52□□□□□ -0.89
SPG11-216ENST00000559347 ATP23Q9Y6H3 246 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms