RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 STK32CQ86UX6 486 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 ANKK1Q8NFD2 765 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 OR6X1Q8NH79 312 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 FAM222BQ8WU58 562 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 HDAC2Q92769 488 aaKnown RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 C14orf79Q96F83 325 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 DUS3LQ96G46 650 aaKnown RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 BOD1Q96IK1 185 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 RSRC1Q96IZ7 334 aaKnown RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 DACH2Q96NX9 599 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 MUS81Q96NY9 551 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 HS3ST6Q96QI5 342 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 TRIM15Q9C019 465 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 OR10A4Q9H209 315 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 MMADHCQ9H3L0 296 aaPredicted RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 GPR35Q9HC97 309 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 ASB6Q9NWX5 421 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 GPR52Q9Y2T5 361 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 ADAM18Q9Y3Q7 739 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 MAGED1Q9Y5V3 778 aaPredicted RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 U3KQV3 271 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 A0A1W2PR80 420 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 HTR3EA5X5Y0 456 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 NPIPB13A6NJU9 1138 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 NPIPB4C9JG80 1138 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 H3BNX3 289 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 TNFRSF11BO00300 401 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 CTAG2O75638 210 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 TRMUO75648 421 aaKnown RBP10.03□□□□□ -0.8
SNX1-204ENST00000559061 TIPRLO75663 272 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 GASTP01350 101 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 HRGP04196 525 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 IGFBP1P08833 259 aaPredicted RBP10.03□□□□□ -0.8
SNX1-204ENST00000559061 SAGP10523 405 aaPredicted RBP10.03□□□□□ -0.8
SNX1-204ENST00000559061 EPXP11678 715 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 CRYGSP22914 178 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 FPR3P25089 353 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 MPGP29372 298 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 IFNA8P32881 189 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 SLC9A3P48764 834 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 ZNF133P52736 654 aaPredicted RBP10.03□□□□□ -0.8
SNX1-204ENST00000559061 IL1RL1Q01638 556 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 ROR2Q01974 943 aaKnown RBP10.03□□□□□ -0.8
SNX1-204ENST00000559061 ZBED5Q49AG3 693 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 ALG10Q5BKT4 473 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 HMBOX1Q6NT76 420 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 OAFQ86UD1 273 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 UBE2J2Q8N2K1 259 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 POMGNT2Q8NAT1 580 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 OR8D4Q8NGM9 314 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 OR1K1Q8NGR3 316 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 HTRA1Q92743 480 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 KISS1RQ969F8 398 aaPredicted RBP10.03□□□□□ -0.8
SNX1-204ENST00000559061 ZC3HAV1LQ96H79 300 aaKnown RBP10.03□□□□□ -0.8
SNX1-204ENST00000559061 GPX7Q96SL4 187 aaPredicted RBP10.03□□□□□ -0.8
SNX1-204ENST00000559061 PLA2G12AQ9BZM1 189 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 NOX3Q9HBY0 568 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 INIPQ9NRY2 104 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 PARPBPQ9NWS1 579 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 TAS2R16Q9NYV7 291 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 ZNF224Q9NZL3 707 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 IL20RAQ9UHF4 553 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 TMEM5Q9Y2B1 443 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 SAMHD1Q9Y3Z3 626 aaKnown RBP10.03□□□□□ -0.8
SNX1-204ENST00000559061 SLC25A15Q9Y619 301 aa10.03□□□□□ -0.8
SNX1-204ENST00000559061 ABCA12Q86UK0 2595 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 ABCA4P78363 2273 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 UNC119BA6NIH7 251 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 OR5H1A6NKK0 313 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 A6NNC1 897 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 M0R3G1 203 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 SLC43A1O75387 559 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 KRT36O76013 467 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 SEC14L2O76054 403 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 HIST1H2ABP04908 130 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 SMIM11AP58511 58 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 ACTR3P61158 418 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 ERVK-25P63136 954 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 FMODQ06828 376 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 TOP3AQ13472 1001 aaPredicted RBP10.02□□□□□ -0.81
SNX1-204ENST00000559061 KPNB1Q14974 876 aaKnown RBP10.02□□□□□ -0.81
SNX1-204ENST00000559061 CEACAM16Q2WEN9 425 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 HIKESHIQ53FT3 197 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 MESTQ5EB52 335 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 C1orf146Q5VVC0 180 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 ZNF620Q6ZNG0 422 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 HIST3H2AQ7L7L0 130 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 YTHDF3Q7Z739 585 aaKnown RBP10.02□□□□□ -0.81
SNX1-204ENST00000559061 NOXO1Q8NFA2 376 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 BCL2L2Q92843 193 aaPredicted RBP10.02□□□□□ -0.81
SNX1-204ENST00000559061 HIST1H2ACQ93077 130 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 LRR1Q96L50 414 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 KCNK17Q96T54 332 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 NIPSNAP1Q9BPW8 284 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 KATNB1Q9BVA0 655 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 TXNIPQ9H3M7 391 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 CRLF2Q9HC73 371 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 NRIP3Q9NQ35 241 aa10.02□□□□□ -0.81
SNX1-204ENST00000559061 ZNF346Q9UL40 294 aaKnown RBP10.02□□□□□ -0.81
SNX1-204ENST00000559061 UGT2A1Q9Y4X1 527 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms