RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 ZNF726A6NNF4 738 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 KPNA4O00629 521 aaPredicted RBP13.09□□□□□ -0.31
SMAD6-203ENST00000558937 CH25HO95992 272 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 F12P00748 615 aaPredicted RBP13.09□□□□□ -0.31
SMAD6-203ENST00000558937 HLA-HP01893 362 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 TROVE2P10155 538 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMAD6-203ENST00000558937 CSNK1A1P48729 337 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 PDLIM4P50479 330 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 SF3A3Q12874 501 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMAD6-203ENST00000558937 KLF10Q13118 480 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 CYLC2Q14093 348 aaPredicted RBP13.09□□□□□ -0.31
SMAD6-203ENST00000558937 EFNB3Q15768 340 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 REP15Q6BDI9 236 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 CGB2Q6NT52 195 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 TTC33Q6PID6 262 aaPredicted RBP13.09□□□□□ -0.31
SMAD6-203ENST00000558937 ZNF813Q6ZN06 617 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 CCDC80Q76M96 950 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 CALHM3Q86XJ0 350 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 ANKS4BQ8N8V4 417 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 MPP4Q96JB8 637 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 PCDHAC1Q9H158 963 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 PLK3Q9H4B4 646 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 ZNF442Q9H7R0 627 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 FGFR1OP2Q9NVK5 253 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 POFUT2Q9Y2G5 429 aa13.09□□□□□ -0.31
SMAD6-203ENST00000558937 ANK3Q12955 4377 aaKnown RBP13.08□□□□□ -0.32
SMAD6-203ENST00000558937 MRASO14807 208 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 OR6A2O95222 327 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 IFNGR1P15260 489 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 B4GALT1P15291 398 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 THBS4P35443 961 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 ARFIP2P53365 341 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 BIDP55957 195 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 VLDLRP98155 873 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 COQ5Q5HYK3 327 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF627Q7L945 461 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 CARM1Q86X55 608 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 OR8J3Q8NGG0 315 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 RASSF5Q8WWW0 418 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 PROX1Q92786 737 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 LRRC58Q96CX6 371 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 FOXB1Q99853 325 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 VRK1Q99986 396 aaPredicted RBP13.08□□□□□ -0.32
SMAD6-203ENST00000558937 PRSS27Q9BQR3 290 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF426Q9BUY5 554 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 NANSQ9NR45 359 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 B3GNT2Q9NY97 397 aa13.08□□□□□ -0.32
SMAD6-203ENST00000558937 BBIP1A8MTZ0 92 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 A8MV72 311 aaPredicted RBP13.07□□□□□ -0.32
SMAD6-203ENST00000558937 VWC2LB2RUY7 222 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 hCG_2039718K7EN88 272 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 CD79AP11912 226 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 TNFRSF1BP20333 461 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 NPR2P20594 1047 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 PPOXP50336 477 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 ZP4Q12836 540 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 SNTB2Q13425 540 aaKnown RBP13.07□□□□□ -0.32
SMAD6-203ENST00000558937 MELKQ14680 651 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 MAPRE2Q15555 327 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 GSG1Q2KHT4 349 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 MMEL1Q495T6 779 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 SLC35D2Q76EJ3 337 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 SNX32Q86XE0 403 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 SVOPLQ8N434 492 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 LRRC17Q8N6Y2 441 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 TMEM54Q969K7 222 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 MS4A3Q96HJ5 214 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 MDFIQ99750 246 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 SH3GL1Q99961 368 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 ECSITQ9BQ95 431 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 SLC19A3Q9BZV2 496 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 SAR1AQ9NR31 198 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 MRGBPQ9NV56 204 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 TAS2R5Q9NYW4 299 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF224Q9NZL3 707 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF229Q9UJW7 825 aa13.07□□□□□ -0.32
SMAD6-203ENST00000558937 RNF13O43567 381 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 ASAH2BP0C7U1 165 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 UMPSP11172 480 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF16P17020 682 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-203ENST00000558937 USF1P22415 310 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-203ENST00000558937 PIGFQ07326 219 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 DAG1Q14118 895 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 CARTPTQ16568 116 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 KRT80Q6KB66 452 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 ERICH5Q6P6B1 374 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 DEF8Q6ZN54 512 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 SPATA21Q7Z572 469 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 NANOGNBQ7Z5D8 188 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 HIPK1Q86Z02 1210 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 IL17RDQ8NFM7 739 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 OR6X1Q8NH79 312 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 PIMREGQ9BSJ6 248 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 MYOZ1Q9NP98 299 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-203ENST00000558937 MEPEQ9NQ76 525 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-203ENST00000558937 GLTPQ9NZD2 209 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 BAG5Q9UL15 447 aa13.06□□□□□ -0.32
SMAD6-203ENST00000558937 SH3GLB1Q9Y371 365 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms