RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 VNN3Q9NY84 501 aa11.03□□□□□ -0.64
RABGGTA-207ENST00000558936 B3GNT2Q9NY97 397 aa11.03□□□□□ -0.64
RABGGTA-207ENST00000558936 ZFHX3Q15911 3703 aa11.02□□□□□ -0.64
RABGGTA-207ENST00000558936 IGHV1-18A0A0C4DH31 117 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 M0R3G1 203 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 ACOT8O14734 319 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 PTP4A3O75365 173 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 PDE5AO76074 875 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 AHCYP23526 432 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 CD40P25942 277 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 CALCRP30988 508 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 OMPP47874 163 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 BIDP55957 195 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 ADAM8P78325 824 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 MSMPQ1L6U9 139 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 THSD4Q6ZMP0 1018 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 SLC35D2Q76EJ3 337 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 ZNF627Q7L945 461 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 IGFN1Q86VF2 1251 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 UEVLDQ8IX04 471 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 POMGNT2Q8NAT1 580 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 C1orf162Q8NEQ5 155 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 WFDC11Q8NEX6 87 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 OR13C2Q8NGS9 318 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 ASB10Q8WXI3 467 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 HDAC2Q92769 488 aaKnown RBP11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 FAM162AQ96A26 154 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 SGTBQ96EQ0 304 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 TNFRSF13CQ96RJ3 184 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 ZNF347Q96SE7 839 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 ASPNQ9BXN1 380 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 CRLF2Q9HC73 371 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 CRNNQ9UBG3 495 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 UPB1Q9UBR1 384 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 HIF3AQ9Y2N7 669 aa11.02□□□□□ -0.65
RABGGTA-207ENST00000558936 TRAV27A0A087WT01 109 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 CIB4A0PJX0 185 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 BLOC1S5-TXNDC5H3BN57 136 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 OVOL3O00110 214 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 ABCD4O14678 606 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 HS3ST1O14792 307 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 GSTA4O15217 222 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 NDUFS7O75251 213 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 IFNA14P01570 189 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 IGLV1-44P01699 117 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 IFNW1P05000 195 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 SCG5P05408 212 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 IGFBP1P08833 259 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 PATE4P0C8F1 98 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 IFI30P13284 250 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 NQO1P15559 274 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 ZNF133P52736 654 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 ST3GAL3Q11203 375 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 MFSD13AQ14CX5 517 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 ZNF672Q499Z4 452 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 OR7E24Q6IFN5 339 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 PGM2L1Q6PCE3 622 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 CYP2R1Q6VVX0 501 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 ZNF584Q8IVC4 421 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 C10orf53Q8N6V4 93 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 OR6X1Q8NH79 312 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 BCAS4Q8TDM0 211 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 BPIFA2Q96DR5 249 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 MUCL1Q96DR8 90 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 PYURFQ96I23 114 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 LRR1Q96L50 414 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 ESRP2Q9H6T0 727 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 NGBQ9NPG2 151 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 DLL4Q9NR61 685 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 BEX4Q9NWD9 120 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 RNF115Q9Y4L5 304 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 UGT2A1Q9Y4X1 527 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 NOX1Q9Y5S8 564 aa11.01□□□□□ -0.65
RABGGTA-207ENST00000558936 YLPM1P49750 1951 aaKnown RBP11□□□□□ -0.65
RABGGTA-207ENST00000558936 ARPC4-TTLL3A0A0A6YYG9 625 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 A0A1W2PRQ8 180 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 SLC43A1O75387 559 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 TRMUO75648 421 aaKnown RBP11□□□□□ -0.65
RABGGTA-207ENST00000558936 IGKV3-15P01624 115 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 CD3EP07766 207 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 GTF2E2P29084 291 aaKnown RBP11□□□□□ -0.65
RABGGTA-207ENST00000558936 GPR4P46093 362 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 MYBPC1Q00872 1141 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 FMODQ06828 376 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 PPP1R8Q12972 351 aaKnown RBP11□□□□□ -0.65
RABGGTA-207ENST00000558936 C1DQ13901 141 aaKnown RBP11□□□□□ -0.65
RABGGTA-207ENST00000558936 DGCR6Q14129 220 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 TRAM2Q15035 370 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 MST1LQ2TV78 715 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 SAMD4BQ5PRF9 694 aaKnown RBP11□□□□□ -0.65
RABGGTA-207ENST00000558936 C11orf71Q6IPW1 123 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 KLHL24Q6TFL4 600 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 C20orf204Q6ZNR8 217 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 TMPRSS11FQ6ZWK6 438 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 MBOAT2Q6ZWT7 520 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 FKBP9P1Q75LS8 142 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 SSX8Q7RTT4 187 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 TRPM8Q7Z2W7 1104 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 ZER1Q7Z7L7 766 aa11□□□□□ -0.65
RABGGTA-207ENST00000558936 TGIF2LYQ8IUE0 185 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms