RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 KRCC1Q9NPI7 259 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-205ENST00000558428 TMEM5Q9Y2B1 443 aa10.86□□□□□ -0.67
SMAD3-205ENST00000558428 HIF3AQ9Y2N7 669 aa10.86□□□□□ -0.67
SMAD3-205ENST00000558428 LRBAP50851 2863 aa10.86□□□□□ -0.67
SMAD3-205ENST00000558428 A0A1W2PR80 420 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 SH3PXD2BA1X283 911 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 AQP12BA6NM10 295 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 MCIDASD6RGH6 385 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 RPL36A-HNRNPH2H7BZ11 118 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 CDC42EP2O14613 210 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 GSC2O15499 205 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 CLOCKO15516 846 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 KLF4O43474 513 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 TSPAN19P0C672 248 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 MAGEA2P43356 314 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 CSNK1A1P48729 337 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 SLC9A3P48764 834 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 RPS4XP62701 263 aaKnown RBP10.85□□□□□ -0.67
SMAD3-205ENST00000558428 FLOT2Q14254 428 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 SEC23BQ15437 767 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 CEACAM16Q2WEN9 425 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 ALG10Q5BKT4 473 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 PHYHD1Q5SRE7 291 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 TMPRSS11FQ6ZWK6 438 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 SSX8Q7RTT4 187 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 AQP12AQ8IXF9 295 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 C17orf78Q8N4C9 275 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 OR4K5Q8NGD3 323 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 OR1K1Q8NGR3 316 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 OR13C2Q8NGS9 318 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 OR6X1Q8NH79 312 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 PLPPR2Q96GM1 343 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 SLC25A44Q96H78 314 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-205ENST00000558428 FAM46AQ96IP4 442 aaKnown RBP10.85□□□□□ -0.67
SMAD3-205ENST00000558428 TNFRSF13CQ96RJ3 184 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 FUZQ9BT04 418 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 ULBP2Q9BZM5 246 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 CRLF2Q9HC73 371 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 GPR35Q9HC97 309 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 NGBQ9NPG2 151 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 B3GAT2Q9NPZ5 323 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 SLC17A5Q9NRA2 495 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 TMCC3Q9ULS5 477 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 AURKCQ9UQB9 309 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 POMPQ9Y244 141 aa10.85□□□□□ -0.67
SMAD3-205ENST00000558428 CREBBPQ92793 2442 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 OR10H3O60404 316 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 IGHG1P01857 330 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 RAP2AP10114 183 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 OMPP47874 163 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 DAP3P51398 398 aaKnown RBP10.84□□□□□ -0.67
SMAD3-205ENST00000558428 NR1H2P55055 460 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 SH3BGRP55822 239 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-205ENST00000558428 CTXN1P60606 82 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 CBX1P83916 185 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 TOP3AQ13472 1001 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-205ENST00000558428 ACKR1Q16570 336 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 TBRG1Q3YBR2 411 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 ANKDD1AQ495B1 522 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 HIKESHIQ53FT3 197 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 HDDC2Q7Z4H3 204 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 IGFN1Q86VF2 1251 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 SPATA24Q86W54 205 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 ASB10Q8WXI3 467 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 NRGNQ92686 78 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 ZNF566Q969W8 418 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 ZNF837Q96EG3 531 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-205ENST00000558428 HS3ST6Q96QI5 342 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 ALPK1Q96QP1 1244 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 GLTPQ9NZD2 209 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 SLC7A8Q9UHI5 535 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 AMDHD2Q9Y303 409 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 SLC25A15Q9Y619 301 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 AKAP9Q99996 3911 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 TEX15Q9BXT5 2789 aa10.84□□□□□ -0.67
SMAD3-205ENST00000558428 A0A096LPE4 126 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 A0A1W2PPR1 153 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 A0A1W2PPZ6 126 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 DHRS12A0PJE2 317 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 TNFRSF11BO00300 401 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 KRT36O76013 467 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 PGA4P0DJD7 388 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 PGA3P0DJD8 388 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 LOXP28300 417 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-205ENST00000558428 RPL4P36578 427 aaKnown RBP10.83□□□□□ -0.68
SMAD3-205ENST00000558428 LIMS1P48059 325 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 CLRN1P58418 232 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 PRPS1P60891 318 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 ARF1P84077 181 aaKnown RBP10.83□□□□□ -0.68
SMAD3-205ENST00000558428 FHL1Q13642 323 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 ZBED5Q49AG3 693 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 ANKRD16Q6P6B7 361 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 SEZ6L2Q6UXD5 910 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 CCDC121Q6ZUS5 278 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 ADGRG5Q8IZF4 528 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 WDR31Q8NA23 367 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 LRRC75AQ8NAA5 344 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 NOXO1Q8NFA2 376 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 CANT1Q8WVQ1 401 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms