RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 HBA1P69905 142 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MEP1BQ16820 701 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ATRAIDQ6UW56 229 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF620Q6ZNG0 422 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 WDR5BQ86VZ2 330 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 C19orf47Q8N9M1 422 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF558Q96NG5 402 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 EXOSC3Q9NQT5 275 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MOKQ9UQ07 419 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PGCP20142 388 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 OR10J1P30954 320 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CTAG1AP78358 180 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MAP2K5Q13163 448 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 INSL4Q14641 139 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CALHM2Q9HA72 323 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CFAP74Q9C0B2 1584 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ST8SIA3O43173 380 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 RAD51DO75771 328 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NTF3P20783 257 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 GDF6Q6KF10 455 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM107Q6UX40 140 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 FBP1P09467 338 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TBXA2RP21731 343 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CTBSQ01459 385 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SFXN4Q6P4A7 337 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ESPNLQ6ZVH7 1005 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 OLIG3Q7RTU3 272 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PDCD1LG2Q9BQ51 273 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 DPH1Q9BZG8 443 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 HHATLQ9HCP6 504 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 STARD5Q9NSY2 213 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NPIPA5A0A0B4J1W7 369 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 GABRA5P31644 462 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MYPOPQ86VE0 399 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 THAP3Q8WTV1 239 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 RTP3Q9BQQ7 232 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 FOXE1O00358 373 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 GABRA1P14867 456 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CXCL2P19875 107 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 WNT7BP56706 349 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PSRC1Q6PGN9 363 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF461Q8TAF7 563 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF384Q8TF68 577 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SLC22A18Q96BI1 424 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ALG12Q9BV10 488 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TCRBV5S2A0A599 114 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 H3BQ15 152 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TYRP1P17643 537 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NKG7Q16617 165 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 HHIPQ96QV1 700 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM100Q9NV29 134 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NUP160Q12769 1436 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NOTCH3Q9UM47 2321 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PSMD8P48556 350 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ARRB1P49407 418 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PDX1P52945 283 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PLEKHS1Q5SXH7 462 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 DPY19L2P2Q6ZN68 376 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NUDT9Q9BW91 350 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 A0A1W2PNV4 684 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 HSD11B1P28845 292 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MPGP29372 298 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 DHODHQ02127 395 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 DEFB134Q4QY38 66 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CBLN2Q8IUK8 224 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 RBM24Q9BX46 236 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ALX4Q9H161 411 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 FBXL12Q9NXK8 326 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TRAV1-2A0A0B4J238 106 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SCO2O43819 266 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 F12P00748 615 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 RANP62826 216 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TSPAN31Q12999 210 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM176BQ3YBM2 270 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PDLIM3Q53GG5 364 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 KLHDC8AQ8IYD2 350 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MMP21Q8N119 569 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ZG16BQ96DA0 208 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CUTCQ9NTM9 273 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 INHBBP09529 407 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM11P17152 192 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 HOXA11P31270 313 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SLC6A12P48065 614 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 KCNJ5P48544 419 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TOMM34Q15785 309 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 HENMT1Q5T8I9 393 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 AMDHD1Q96NU7 426 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 F13BP05160 661 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 OR4E1P0C645 316 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NPBWR1P48145 328 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF252P-AS1Q0IIN9 211 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CCINQ13939 588 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 FBXO17Q96EF6 278 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 FAM71F1Q96KD3 344 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 KLF15Q9UIH9 416 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MBD1Q9UIS9 605 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 GJB3O75712 270 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 GLO1Q04760 184 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 VITQ6UXI7 678 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms