RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 UPB1Q9UBR1 384 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 ZNF346Q9UL40 294 aaKnown RBP18.81■□□□□ 0.6
CASC4-204ENST00000557945 ADAM18Q9Y3Q7 739 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 H3BN98 237 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 ZNF432O94892 652 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 PPP1R3DO95685 299 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 IGFBP1P08833 259 aaPredicted RBP18.81■□□□□ 0.6
CASC4-204ENST00000557945 POU1F1P28069 291 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 RPL27P61353 136 aaKnown RBP18.81■□□□□ 0.6
CASC4-204ENST00000557945 LGALS3BPQ08380 585 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 TSPO2Q5TGU0 170 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 ZNF474Q6S9Z5 364 aaPredicted RBP18.81■□□□□ 0.6
CASC4-204ENST00000557945 BEND4Q6ZU67 534 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 HDDC2Q7Z4H3 204 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 CLDN22Q8N7P3 220 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 OR6N1Q8NGY5 312 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 ASB10Q8WXI3 467 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 DNAJC9Q8WXX5 260 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 TSPAN32Q96QS1 320 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 GPX7Q96SL4 187 aaPredicted RBP18.81■□□□□ 0.6
CASC4-204ENST00000557945 RBM24Q9BX46 236 aaKnown RBP18.81■□□□□ 0.6
CASC4-204ENST00000557945 PLA2G12AQ9BZM1 189 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 DCLRE1BQ9H816 532 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 KRT84Q9NSB2 600 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 JKAMPQ9P055 326 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 POFUT2Q9Y2G5 429 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 IER3IP1Q9Y5U9 82 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 FLNCQ14315 2725 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 NPIPB13A6NJU9 1138 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 OR6C65A6NJZ3 312 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 NPIPB4C9JG80 1138 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 IGHMP01871 453 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 OSMP13725 252 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 ACVR1BP36896 505 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 RPS6KA3P51812 740 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 SLC36A3Q495N2 470 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 ARMC4Q5T2S8 1044 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 FBXW9Q5XUX1 488 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 WDFY1Q8IWB7 410 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 TMEM123Q8N131 208 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 GPR137CQ8N3F9 429 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 POMGNT2Q8NAT1 580 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 TEX47Q8TBZ9 253 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 ZNF566Q969W8 418 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 EME1Q96AY2 570 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 LRRC46Q96FV0 321 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 SLC25A44Q96H78 314 aaPredicted RBP18.8■□□□□ 0.6
CASC4-204ENST00000557945 Q96M85 177 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 ZNF570Q96NI8 536 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 ERMAPQ96PL5 475 aaPredicted RBP18.8■□□□□ 0.6
CASC4-204ENST00000557945 RBM4BQ9BQ04 359 aaKnown RBP18.8■□□□□ 0.6
CASC4-204ENST00000557945 RBM4Q9BWF3 364 aaKnown RBP18.8■□□□□ 0.6
CASC4-204ENST00000557945 TSSK6Q9BXA6 273 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 NRIP3Q9NQ35 241 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 SLC7A10Q9NS82 523 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 IL20Q9NYY1 176 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 REV1Q9UBZ9 1251 aa18.8■□□□□ 0.6
CASC4-204ENST00000557945 HELZ2Q9BYK8 2649 aaKnown RBP18.79■□□□□ 0.6
CASC4-204ENST00000557945 TEX13CA0A0J9YWL9 993 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 MITFO75030 526 aaPredicted RBP18.79■□□□□ 0.6
CASC4-204ENST00000557945 UPK3AO75631 287 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 IGHG1P01857 330 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 TP53P04637 393 aaPredicted RBP18.79■□□□□ 0.6
CASC4-204ENST00000557945 IGFBP5P24593 272 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 CSNK1A1P48729 337 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 CLRN1P58418 232 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 RUNX1T1Q06455 604 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 FAPQ12884 760 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 CBR4Q8N4T8 237 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 ARIH2OSQ8N7S6 290 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 OR8D4Q8NGM9 314 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 C9orf16Q9BUW7 83 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 STX18Q9P2W9 335 aaKnown RBP18.79■□□□□ 0.6
CASC4-204ENST00000557945 ALPK2Q86TB3 2170 aa18.79■□□□□ 0.6
CASC4-204ENST00000557945 USP9XQ93008 2570 aaPredicted RBP18.78■□□□□ 0.6
CASC4-204ENST00000557945 SPTBN1Q01082 2364 aaKnown RBP18.78■□□□□ 0.6
CASC4-204ENST00000557945 FREM1Q5H8C1 2179 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 A6NIZ1 184 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 M0R3G1 203 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 EI24O14681 340 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 TRMUO75648 421 aaKnown RBP18.78■□□□□ 0.6
CASC4-204ENST00000557945 ACADSP16219 412 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 NOS3P29474 1203 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 RAP1BP61224 184 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 RAP1AP62834 184 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 TRIP10Q15642 601 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 FAM205BPQ63HN1 556 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 KDM4DQ6B0I6 523 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 GPR139Q6DWJ6 353 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 Q6ZT83 130 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 C20orf196Q8IYI0 205 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 SYT14Q8NB59 555 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 ZNF519Q8TB69 540 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 MAGEE2Q8TD90 523 aaPredicted RBP18.78■□□□□ 0.6
CASC4-204ENST00000557945 RNASE6Q93091 150 aaKnown RBP18.78■□□□□ 0.6
CASC4-204ENST00000557945 RASD2Q96D21 266 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 ALKBH3Q96Q83 286 aaPredicted RBP18.78■□□□□ 0.6
CASC4-204ENST00000557945 OSBPL10Q9BXB5 764 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 B3GAT2Q9NPZ5 323 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 ASB6Q9NWX5 421 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms