RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 EXOC3L2Q2M3D2 409 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 NRN1LQ496H8 165 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 TSPO2Q5TGU0 170 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 HMBOX1Q6NT76 420 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 CD300LDQ6UXZ3 194 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 DPY19L2P2Q6ZN68 376 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 ZER1Q7Z7L7 766 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 C20orf196Q8IYI0 205 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 TMEM123Q8N131 208 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 KDM8Q8N371 416 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF433Q8N7K0 673 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-234ENST00000557703 OR4C15Q8NGM1 316 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 MAGEE2Q8TD90 523 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF566Q969W8 418 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 MUCL1Q96DR8 90 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 BDH2Q9BUT1 245 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 OSBPL10Q9BXB5 764 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 DGCR6LQ9BY27 220 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 SMURF2Q9HAU4 748 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 SLC7A10Q9NS82 523 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 SEC14L4Q9UDX3 406 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 SIGLEC7Q9Y286 467 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 AP4S1Q9Y587 144 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 MAGED1Q9Y5V3 778 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-234ENST00000557703 CIB4A0PJX0 185 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 UNC119BA6NIH7 251 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 MCIDASD6RGH6 385 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 C11orf98E9PRG8 122 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 IMPA2O14732 288 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 CD14P08571 375 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 AQP2P41181 271 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 GSSP48637 474 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 SELENOPP49908 381 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 RPL27P61353 136 aaKnown RBP12.07□□□□□ -0.48
SHMT2-234ENST00000557703 FAPQ12884 760 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 LAPTM4AQ15012 233 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF627Q7L945 461 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 BHLHA15Q7RTS1 189 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-234ENST00000557703 CXorf67Q86X51 503 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-234ENST00000557703 CLDN22Q8N7P3 220 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 FAM46AQ96IP4 442 aaKnown RBP12.07□□□□□ -0.48
SHMT2-234ENST00000557703 MED18Q9BUE0 208 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 ALG12Q9BV10 488 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 DENND2DQ9H6A0 471 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-234ENST00000557703 MCCC2Q9HCC0 563 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 PRSS50Q9UI38 385 aa12.07□□□□□ -0.48
SHMT2-234ENST00000557703 FAM221AA4D161 298 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 OR5H1A6NKK0 313 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 CDC42EP2O14613 210 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 ARPC3O15145 178 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 PIP5K1CO60331 668 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 HLA-DOBP13765 273 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 ANXA8P13928 327 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 PTNP21246 168 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 IGHV1-2P23083 117 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 FASP25445 335 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 HOXC12P31275 282 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 CSNK1A1P48729 337 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 RPS6KA3P51812 740 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF133P52736 654 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-234ENST00000557703 NR1H2P55055 460 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 BIDP55957 195 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 CTXN1P60606 82 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 FHL1Q13642 323 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 ACKR1Q16570 336 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 HIST3H3Q16695 136 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 THEM4Q5T1C6 240 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 ARMC4Q5T2S8 1044 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 CRYBG3Q68DQ2 2970 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF770Q6IQ21 691 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-234ENST00000557703 ANKRD16Q6P6B7 361 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 SMARCD3Q6STE5 483 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 DPPA2Q7Z7J5 298 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 FAM169BQ8N8A8 192 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 LRRC75AQ8NAA5 344 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 OR6N1Q8NGY5 312 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 OR51A7Q8NH64 312 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 GIPC3Q8TF64 312 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 UTP4Q969X6 686 aaKnown RBP12.06□□□□□ -0.48
SHMT2-234ENST00000557703 TNFRSF13CQ96RJ3 184 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 MRPL13Q9BYD1 178 aaKnown RBP12.06□□□□□ -0.48
SHMT2-234ENST00000557703 ACTR6Q9GZN1 396 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 NRIP3Q9NQ35 241 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 MED29Q9NX70 200 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 IL20Q9NYY1 176 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 GLTPQ9NZD2 209 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 AMDHD2Q9Y303 409 aa12.06□□□□□ -0.48
SHMT2-234ENST00000557703 NOTCH2Q04721 2471 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 TRAV27A0A087WT01 109 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF99A8MXY4 864 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-234ENST00000557703 E2F6O75461 281 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 WNT11O96014 354 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 F13BP05160 661 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 PGA4P0DJD7 388 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 PGA3P0DJD8 388 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 ACADSP16219 412 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 FUT4P22083 530 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 CRYGSP22914 178 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 SLC6A6P31641 620 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 RPL4P36578 427 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms