RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 H3BN98 237 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 PPP1R3DO95685 299 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 CD14P08571 375 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 POU1F1P28069 291 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 TRIP10Q15642 601 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 ARMC4Q5T2S8 1044 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 FAM122BQ7Z309 247 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 LILRB4Q8NHJ6 448 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 MAGEE2Q8TD90 523 aaPredicted RBP13.52□□□□□ -0.25
NEDD1-213ENST00000557644 ASB10Q8WXI3 467 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 EME1Q96AY2 570 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 APH1AQ96BI3 265 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 Q96M85 177 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 GPX7Q96SL4 187 aaPredicted RBP13.52□□□□□ -0.25
NEDD1-213ENST00000557644 IFT27Q9BW83 186 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 KRT84Q9NSB2 600 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 IER3IP1Q9Y5U9 82 aa13.52□□□□□ -0.25
NEDD1-213ENST00000557644 MGRN1O60291 552 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 CD8BP10966 210 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 PEX2P28328 305 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 OR3A2P47893 321 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 TSPO2Q5TGU0 170 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 ZNF474Q6S9Z5 364 aaPredicted RBP13.51□□□□□ -0.25
NEDD1-213ENST00000557644 DPY19L2P2Q6ZN68 376 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 TMEM123Q8N131 208 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 CLDN22Q8N7P3 220 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 ASB5Q8WWX0 329 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 RASD2Q96D21 266 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 RNPEPL1Q9HAU8 725 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 TBC1D23Q9NUY8 699 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 PARPBPQ9NWS1 579 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 RCE1Q9Y256 329 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 WIPF3A6NGB9 483 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 UPK3AO75631 287 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 ALPLP05186 524 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 OSMP13725 252 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 IGFBP5P24593 272 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 SLC6A6P31641 620 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 RPL27P61353 136 aaKnown RBP13.51□□□□□ -0.25
NEDD1-213ENST00000557644 TAF11Q15544 211 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 ZNF808Q8N4W9 903 aaPredicted RBP13.51□□□□□ -0.25
NEDD1-213ENST00000557644 FAM26EQ8N5C1 309 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 OR6X1Q8NH79 312 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 RBM4BQ9BQ04 359 aaKnown RBP13.51□□□□□ -0.25
NEDD1-213ENST00000557644 RBM4Q9BWF3 364 aaKnown RBP13.51□□□□□ -0.25
NEDD1-213ENST00000557644 TSSK6Q9BXA6 273 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 SLC7A10Q9NS82 523 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 POFUT2Q9Y2G5 429 aa13.51□□□□□ -0.25
NEDD1-213ENST00000557644 TEX13CA0A0J9YWL9 993 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 ZNF726A6NNF4 738 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 A8MXE2 369 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 IGHMP01871 453 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 EPHA2P29317 976 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 DAP3P51398 398 aaKnown RBP13.5□□□□□ -0.25
NEDD1-213ENST00000557644 DBPQ10586 325 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-213ENST00000557644 DAG1Q14118 895 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 PHYHD1Q5SRE7 291 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 XKRXQ6PP77 449 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 ZBTB49Q6ZSB9 765 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 LINGO2Q7L985 606 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 UBE2J2Q8N2K1 259 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 SYT14Q8NB59 555 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 OR52L1Q8NGH7 329 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 OR4Q3Q8NH05 313 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 ZNF519Q8TB69 540 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 ERMAPQ96PL5 475 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-213ENST00000557644 ALKBH3Q96Q83 286 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-213ENST00000557644 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 PIGMQ9H3S5 423 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 JKAMPQ9P055 326 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 GRHPRQ9UBQ7 328 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 CLEC18AA5D8T8 446 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 H7C1C5 153 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 BHLHE40O14503 412 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 IMPA2O14732 288 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 MSTNO14793 375 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 ACVR1BP36896 505 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 POLR2IP36954 125 aaKnown RBP13.5□□□□□ -0.25
NEDD1-213ENST00000557644 FOXG1P55316 489 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-213ENST00000557644 LCN6P62502 163 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 SLC35F1Q5T1Q4 408 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 TMEM236Q5W0B7 351 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 RPL13AP3Q6NVV1 102 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 CLEC18BQ6UXF7 455 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 CLEC18CQ8NCF0 446 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 HDAC2Q92769 488 aaKnown RBP13.5□□□□□ -0.25
NEDD1-213ENST00000557644 SLC25A44Q96H78 314 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-213ENST00000557644 ZNF570Q96NI8 536 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 SLCO5A1Q9H2Y9 848 aa13.5□□□□□ -0.25
NEDD1-213ENST00000557644 SPTAN1Q13813 2472 aaKnown RBP13.49□□□□□ -0.25
NEDD1-213ENST00000557644 UTP20O75691 2785 aaKnown RBP13.49□□□□□ -0.25
NEDD1-213ENST00000557644 NPIPB13A6NJU9 1138 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 NPIPB4C9JG80 1138 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 TRMUO75648 421 aaKnown RBP13.49□□□□□ -0.25
NEDD1-213ENST00000557644 PGA4P0DJD7 388 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 PGA3P0DJD8 388 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 SDHAP31040 664 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
NEDD1-213ENST00000557644 SLC34A1Q06495 639 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms