RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 LRRC74BQ6ZQY2 392 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 C17orf107Q6ZR85 190 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 GDPD3Q7L5L3 318 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 LYG2Q86SG7 212 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 VRK2Q86Y07 508 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 C17orf78Q8N4C9 275 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM35BQ8NCS4 154 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CATSPER1Q8NEC5 780 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 BPIFCQ8NFQ6 507 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 OR2D3Q8NGH3 330 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 OR56B1Q8NGI3 324 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ACTRT1Q8TDG2 376 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 RNF138Q8WVD3 245 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 MRPL53Q96EL3 112 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 DTD2Q96FN9 168 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 C4orf36Q96KX1 117 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF599Q96NL3 588 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 KCNA7Q96RP8 456 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 C11orf70Q9BRQ4 267 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TTYH2Q9BSA4 534 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 NICN1Q9BSH3 213 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 GPR174Q9BXC1 333 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 STRADBQ9C0K7 418 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 OR2AG1Q9H205 316 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 LRRN3Q9H3W5 708 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF665Q9H7R5 613 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 KAT8Q9H7Z6 458 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 IL1RAPQ9NPH3 570 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 UFSP2Q9NUQ7 469 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ONECUT1Q9UBC0 465 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 PISDQ9UG56 409 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 MLXQ9UH92 298 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 EMCNQ9ULC0 261 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 STAP1Q9ULZ2 295 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 RPH3ALQ9UNE2 315 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 MRPS28Q9Y2Q9 187 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 NSG2Q9Y328 171 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC7Q96NW7 1537 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CACNA1FO60840 1977 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TROQ12816 1431 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 LINC00862A6NCI5 91 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 HELTA6NFD8 242 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FABP12A6NFH5 140 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ARHGAP42A6NI28 874 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 METTL15A6NJ78 407 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 C12orf71A8MTZ7 269 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 LOC110117498-PIK3R3F6TDL0 507 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF195O14628 629 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FCMRO60667 390 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MTX2O75431 263 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 POP7O75817 140 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CCNKO75909 580 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 LYNP07948 512 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GSTA1P08263 222 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 DBTP11182 482 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RAB3AP20336 220 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 G0S2P27469 103 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CCR7P32248 378 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MPIP34949 423 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CD79BP40259 229 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MATKP42679 507 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 HLCSP50747 726 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ATP5J2P56134 94 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RIPPLY3P57055 190 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GTF2BQ00403 316 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 IL9RQ01113 521 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NAAAQ02083 359 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 BST1Q10588 318 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PPP1R8Q12972 351 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GRK1Q15835 563 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TNFAIP8L3Q5GJ75 292 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PIGGQ5H8A4 983 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 DCST2Q5T1A1 773 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PRAMEF7Q5VXH5 474 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SEL1L3Q68CR1 1132 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CYB5R2Q6BCY4 276 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SLC39A4Q6P5W5 647 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 BAIAP2L2Q6UXY1 529 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PGAP1Q75T13 922 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SCD5Q86SK9 330 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ECHDC2Q86YB7 292 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 UBE2J2Q8N2K1 259 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MREGQ8N565 214 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 OR52B4Q8NGK2 314 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 OR1K1Q8NGR3 316 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RPLP0P6Q8NHW5 317 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF596Q8TC21 504 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KCTD4Q8WVF5 259 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 DYDC1Q8WWB3 177 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PRRC1Q96M27 445 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PPP1R2P1Q96PQ5 205 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CHP1Q99653 195 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NAT9Q9BTE0 207 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC61Q9BV99 259 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FICDQ9BVA6 458 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GGACTQ9BVM4 153 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 VCX2Q9H322 139 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RGCCQ9H4X1 137 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 WDR54Q9H977 334 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms