RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PQLC3Q8N755 202 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 SLC37A3Q8NCC5 494 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 OR7A2PQ8NGA2 310 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 OR5L2Q8NGL0 311 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 OR9A1PQ8NGU1 263 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 RAPGEF5Q92565 580 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 MRPL24Q96A35 216 aaKnown RBP3.12□□□□□ -1.91
CHD8-212ENST00000557329 PYCR2Q96C36 320 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 CDKN2AIPNLQ96HQ2 116 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 FAM71F1Q96KD3 344 aaPredicted RBP3.12□□□□□ -1.91
CHD8-212ENST00000557329 ZNF597Q96LX8 424 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 RNF157Q96PX1 679 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 ZNF300Q96RE9 604 aaPredicted RBP3.12□□□□□ -1.91
CHD8-212ENST00000557329 CCT8L2Q96SF2 557 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 ZNF670Q9BS34 389 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 CACNG6Q9BXT2 260 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 UGT2B28Q9BY64 529 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 GANQ9H2C0 597 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 HAUS4Q9H6D7 363 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 FOLH1BQ9HBA9 442 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 MYNNQ9NPC7 610 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 PRTFDC1Q9NRG1 225 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 CHMP5Q9NZZ3 219 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 ARMCX1Q9P291 453 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 COPS7AQ9UBW8 275 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 PRDM4Q9UKN5 801 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 RNF115Q9Y4L5 304 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 NINQ8N4C6 2090 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 NBEAL2Q6ZNJ1 2754 aa3.12□□□□□ -1.91
CHD8-212ENST00000557329 ALPK2Q86TB3 2170 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 MGAM2Q2M2H8 2515 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 IGKV1-8A0A0C4DH67 115 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 A0A1W2PNV4 684 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 A0A1W2PPV9 198 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 C17orf105B2RV13 164 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 E5RI56 91 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 CDC7O00311 574 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 ADAM20O43506 726 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 LCMT2O60294 686 aaKnown RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 ANXA9O76027 345 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 LY6HO94772 140 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 GAS8O95995 478 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 PRB2P02812 416 aaPredicted RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 PTMAP06454 111 aaKnown RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 RNH1P13489 461 aaKnown RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 SLC25A16P16260 332 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 SHC1P29353 583 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 COILP38432 576 aaPredicted RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 NAGLUP54802 743 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 LMO4P61968 165 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 BTN3A2P78410 334 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 RGS1Q08116 209 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 KLHL30Q0D2K2 578 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 ILF2Q12905 390 aaKnown RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 OPCMLQ14982 345 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 STK11Q15831 433 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 SGCBQ16585 318 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 NRF1Q16656 503 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 VWC2Q2TAL6 325 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 AGAP6Q5VW22 663 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 SCIMPQ6UWF3 145 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 TMEM64Q6YI46 380 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 BZW1Q7L1Q6 419 aaKnown RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 ZNF567Q8N184 647 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 METTL4Q8N3J2 472 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 SVOPLQ8N434 492 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 TBC1D19Q8N5T2 526 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 LRRC17Q8N6Y2 441 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 ZNF321PQ8N8H1 164 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 APCDD1LQ8NCL9 501 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 ZNF740Q8NDX6 193 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 NFAM1Q8NET5 270 aaPredicted RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 OR10G3Q8NGC4 313 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 OR1J4Q8NGS1 313 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 LKAAEAR1Q8TD35 194 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 SLC26A7Q8TE54 656 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 RASL10AQ92737 203 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 P3H4Q92791 437 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 STARD4Q96DR4 205 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 PANX3Q96QZ0 392 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 ABHD1Q96SE0 405 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 TBL1YQ9BQ87 522 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 ACTR6Q9GZN1 396 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 Q9H8V8 135 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 CNOT10Q9H9A5 744 aaKnown RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 LPAR2Q9HBW0 351 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 B3GAT2Q9NPZ5 323 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 FAIMQ9NVQ4 179 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 SPATA7Q9P0W8 599 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 ZNF223Q9UK11 482 aaPredicted RBP3.11□□□□□ -1.91
CHD8-212ENST00000557329 CLEC4AQ9UMR7 237 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 FREM3P0C091 2139 aa3.11□□□□□ -1.91
CHD8-212ENST00000557329 IGLV3-16A0A075B6K0 115 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 IGHV3OR16-10A0A075B7F0 116 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 A0A087WUV0 522 aaPredicted RBP3.1□□□□□ -1.91
CHD8-212ENST00000557329 NPIPA5A0A0B4J1W7 369 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 IQANK1A0A1B0GTG1 560 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 TMEM89A2RUT3 159 aa3.1□□□□□ -1.91
CHD8-212ENST00000557329 CCDC162PA2VCL2 907 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms