RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 SNX32Q86XE0 403 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 VRK2Q86Y07 508 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 CADM2Q8N3J6 435 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 ADPRHL1Q8NDY3 354 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 OR6S1Q8NH40 331 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 CKAP2Q8WWK9 683 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 ZMYND19Q96E35 227 aaPredicted RBP7.47□□□□□ -1.21
VRK1-206ENST00000557222 LRR1Q96L50 414 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 TEX37Q96LM6 180 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 PPP1R36Q96LQ0 422 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 ALKBH3Q96Q83 286 aaPredicted RBP7.47□□□□□ -1.21
VRK1-206ENST00000557222 SORT1Q99523 831 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 ZBTB18Q99592 522 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 SOX7Q9BT81 388 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 PTDSS2Q9BVG9 487 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 C20orf27Q9GZN8 174 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 GPR35Q9HC97 309 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 DYNLRB1Q9NP97 96 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 AIG1Q9NVV5 245 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 B3GNT2Q9NY97 397 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 FBXL3Q9UKT7 428 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 ZNF443Q9Y2A4 671 aaPredicted RBP7.47□□□□□ -1.21
VRK1-206ENST00000557222 ZNF281Q9Y2X9 895 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 SPEF1Q9Y4P9 236 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 GPR45Q9Y5Y3 372 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 MEGF8Q7Z7M0 2845 aa7.46□□□□□ -1.21
VRK1-206ENST00000557222 ZNF99A8MXY4 864 aaPredicted RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 TFP02787 698 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 IGFBP1P08833 259 aaPredicted RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 ALDOCP09972 364 aaKnown RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 ITGA2P17301 1181 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 NR4A1P22736 598 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 GTF2E2P29084 291 aaKnown RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 IL12AP29459 219 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 GLRXP35754 106 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 CDKN2CP42773 168 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 CLDN17P56750 224 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 TMEM33P57088 247 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 RPS23P62266 143 aaKnown RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 EGR4Q05215 589 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 LGALS3BPQ08380 585 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 BNIP2Q12982 314 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 C1DQ13901 141 aaKnown RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 MMEL1Q495T6 779 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 FAM69AQ5T7M9 428 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 USP43Q70EL4 1123 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 H1FNTQ75WM6 255 aaPredicted RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 NLRC3Q7RTR2 1065 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 GLCCI1Q86VQ1 547 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 CLIP4Q8N3C7 705 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 GPR137CQ8N3F9 429 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 SVOPLQ8N434 492 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 LSMEM1Q8N8F7 131 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 SLC38A5Q8WUX1 472 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 DNAJA4Q8WW22 397 aaPredicted RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 MRPL24Q96A35 216 aaKnown RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 EAF1Q96JC9 268 aaPredicted RBP7.46□□□□□ -1.22
VRK1-206ENST00000557222 NUF2Q9BZD4 464 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 RACGAP1Q9H0H5 632 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 NOX3Q9HBY0 568 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 CRLF2Q9HC73 371 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 BCL2L10Q9HD36 194 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 B3GAT1Q9P2W7 334 aa7.46□□□□□ -1.22
VRK1-206ENST00000557222 WDR91A4D1P6 747 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 TRPC5OSA6NMA1 111 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 SDHDO14521 159 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 ENTPD5O75356 428 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 SLC22A3O75751 556 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 C1QCP02747 245 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 GSNP06396 782 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 ADRA2AP08913 450 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 ZNF35P13682 527 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 PRG2P13727 222 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 IDO1P14902 403 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 ETS2P15036 469 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 ACHEP22303 614 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 CFPP27918 469 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 IL2RGP31785 369 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 CRATP43155 626 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 RPS5P46782 204 aaKnown RBP7.45□□□□□ -1.22
VRK1-206ENST00000557222 DSTNP60981 165 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 TUBA1BP68363 451 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 TUBA4AP68366 448 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 SRSF2Q01130 221 aaKnown RBP7.45□□□□□ -1.22
VRK1-206ENST00000557222 STX3Q13277 289 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 SNTB2Q13425 540 aaKnown RBP7.45□□□□□ -1.22
VRK1-206ENST00000557222 CEACAM16Q2WEN9 425 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 ZNF311Q5JNZ3 666 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 TUBA1AQ71U36 451 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 MDP1Q86V88 176 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 C20orf196Q8IYI0 205 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 CDK20Q8IZL9 346 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 TMEM123Q8N131 208 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 AENQ8WTP8 325 aaKnown RBP7.45□□□□□ -1.22
VRK1-206ENST00000557222 RDH5Q92781 318 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 SLC38A4Q969I6 547 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 SLC25A36Q96CQ1 311 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 PKNOX2Q96KN3 472 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 OR2M2Q96R28 347 aa7.45□□□□□ -1.22
VRK1-206ENST00000557222 SNX18Q96RF0 628 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms