RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 IGHEP01854 428 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 HSMCR30P0CW71 290 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PRR23D2P0DMB1 279 aaPredicted RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 ADORA3P0DMS8 318 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 GP1BBP13224 206 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ZNF182P17025 639 aaPredicted RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 PGCP20142 388 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ACP1P24666 158 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CXCR1P25024 350 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PSMA1P25786 263 aaKnown RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 AVPR2P30518 371 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 LIPAP38571 399 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 TSPAN7P41732 249 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 HTR3AP46098 478 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 MAP2K6P52564 334 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CDH11P55287 796 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 SLC26A5P58743 744 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PRPS1P60891 318 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CRYZQ08257 329 aaKnown RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 LGALS3BPQ08380 585 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 C17orf67Q0P5P2 114 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PLCXD2Q0VAA5 305 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 SKP2Q13309 424 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ITGADQ13349 1161 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 SPCS2Q15005 226 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 EBPQ15125 230 aaKnown RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 PON3Q15166 354 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 MED22Q15528 200 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 NNATQ16517 81 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 C11orf87Q6NUJ2 197 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 SLC30A6Q6NXT4 461 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 C19orf48Q6RUI8 117 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 TMEM205Q6UW68 189 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 KIRREL2Q6UWL6 708 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 TMPRSS11AQ6ZMR5 421 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 WDR88Q6ZMY6 472 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 USP43Q70EL4 1123 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 COX15Q7KZN9 410 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 TMPRSS9Q7Z410 1059 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CPEB2Q7Z5Q1 589 aaKnown RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 ADCK1Q86TW2 530 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 MARCH3Q86UD3 253 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 MEX3DQ86XN8 651 aaKnown RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 EGFL6Q8IUX8 553 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CPOQ8IVL8 374 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 C9orf40Q8IXQ3 194 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 SLC15A4Q8N697 577 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 C10orf53Q8N6V4 93 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ZNF321PQ8N8H1 164 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ZNF441Q8N8Z8 693 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 SLC38A9Q8NBW4 561 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PSD4Q8NDX1 1056 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 FAM71CQ8NEG0 241 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 NFAM1Q8NET5 270 aaPredicted RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 KBTBD8Q8NFY9 601 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 OR52I1Q8NGK6 324 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 OR8D4Q8NGM9 314 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 OR4Q3Q8NH05 313 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 OR5W2Q8NH69 310 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PFN4Q8NHR9 129 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ZNF563Q8TA94 476 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 NUBPLQ8TB37 319 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 FANK1Q8TC84 345 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 LIPHQ8WWY8 451 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 S100ZQ8WXG8 99 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PTP4A1Q93096 173 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 OMA1Q96E52 524 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 DTNBP1Q96EV8 351 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 VMP1Q96GC9 406 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 GAL3ST4Q96RP7 486 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 TEAD3Q99594 435 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 LPAR4Q99677 370 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CMKLR1Q99788 373 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ZPBPQ9BS86 351 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 RHNO1Q9BSD3 238 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 DPH1Q9BZG8 443 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PLA2G12AQ9BZM1 189 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 STRADBQ9C0K7 418 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 MMP27Q9H306 513 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 OR52D1Q9H346 318 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 DSN1Q9H410 356 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ZBTB20Q9HC78 741 aaPredicted RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 MEPEQ9NQ76 525 aaPredicted RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 FSCN3Q9NQT6 498 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CMC2Q9NRP2 79 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 INPP5EQ9NRR6 644 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 C20orf141Q9NUB4 165 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 OCIAD1Q9NX40 245 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 BABAM2Q9NXR7 383 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 SLC39A1Q9NY26 324 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 HAO2Q9NYQ3 351 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 FAM30AQ9NZY2 134 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CTSFQ9UBX1 484 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 KLHL21Q9UJP4 597 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 SIGLEC7Q9Y286 467 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CARD8Q9Y2G2 431 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 SLC6A5Q9Y345 797 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ZNF337Q9Y3M9 751 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 A3GALT2U3KPV4 340 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 TRPM6Q9BX84 2022 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms