RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 MAP2K6P52564 334 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 SEC61A1P61619 476 aaKnown RBP4.76□□□□□ -1.65
ATXN3-245ENST00000556958 POU6F2P78424 691 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF763Q0D2J5 394 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 TBX2Q13207 712 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-245ENST00000556958 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 MLANAQ16655 118 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 SLC35F1Q5T1Q4 408 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 NIPAL3Q6P499 406 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 PIWIL3Q7Z3Z3 882 aaKnown RBP4.76□□□□□ -1.65
ATXN3-245ENST00000556958 GOLGA7Q7Z5G4 137 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 ISCA2Q86U28 154 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 GPAT4Q86UL3 456 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 VSTM4Q8IW00 320 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 DDIASQ8IXT1 998 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF614Q8N883 585 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 SCCPDHQ8NBX0 429 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 OR4C13Q8NGP0 309 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 OR5R1Q8NH85 324 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF519Q8TB69 540 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 C16orf78Q8WTQ4 265 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 GATAD1Q8WUU5 269 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 DCAKDQ8WVC6 231 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 SELENOMQ8WWX9 145 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 NSMAFQ92636 917 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 UBXN10Q96LJ8 280 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 ALKBH3Q96Q83 286 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-245ENST00000556958 NUDT16L1Q9BRJ7 211 aaKnown RBP4.76□□□□□ -1.65
ATXN3-245ENST00000556958 PCGF1Q9BSM1 259 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 BTBD2Q9BX70 525 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 NELFAQ9H3P2 528 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 RHOJQ9H4E5 214 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 GLIPR2Q9H4G4 154 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 NOL11Q9H8H0 719 aaKnown RBP4.76□□□□□ -1.65
ATXN3-245ENST00000556958 A4GALTQ9NPC4 353 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 MIEF1Q9NQG6 463 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 CYSLTR2Q9NS75 346 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 B3GNT2Q9NY97 397 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 SLC17A7Q9P2U7 560 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 MIOXQ9UGB7 285 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 TBK1Q9UHD2 729 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 PCDHGB4Q9UN71 923 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 SNX6Q9UNH7 406 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 PLXNB1O43157 2135 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 HEATR1Q9H583 2144 aaKnown RBP4.75□□□□□ -1.65
ATXN3-245ENST00000556958 IGHV1-69DA0A0B4J2H0 117 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 CENPVL1A0A0U1RR11 272 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 CENPVL3A0A0U1RRI6 287 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 CCDC189A1A4V9 331 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 GOLGA6L6A8MZA4 724 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 SPRY3O43610 288 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 PCDH7O60245 1069 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 UPK3AO75631 287 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 TOX4O94842 621 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 IGHV1-69P01742 117 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 HLA-HP01893 362 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 LCKP06239 509 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 GPIP06744 558 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 FBP1P09467 338 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 OR8G3PP0DMU2 310 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 PF4V1P10720 104 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 HSD3B1P14060 373 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF14P17017 642 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-245ENST00000556958 HSD3B2P26439 372 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 HOXD3P31249 432 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-245ENST00000556958 RPL4P36578 427 aaKnown RBP4.75□□□□□ -1.65
ATXN3-245ENST00000556958 GDNFP39905 211 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 MDH2P40926 338 aaKnown RBP4.75□□□□□ -1.65
ATXN3-245ENST00000556958 HTR3AP46098 478 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 SELENOPP49908 381 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF75DP51815 510 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ALDH18A1P54886 795 aaKnown RBP4.75□□□□□ -1.65
ATXN3-245ENST00000556958 BTG1P62324 171 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ACSM2AQ08AH3 577 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 MGAT5Q09328 741 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 C2orf80Q0P641 193 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 FRG1Q14331 258 aaKnown RBP4.75□□□□□ -1.65
ATXN3-245ENST00000556958 DUSP5Q16690 384 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 PFKFB4Q16877 469 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ARHGAP11BQ3KRB8 267 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 TCTEX1D4Q5JR98 221 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 CCNJQ5T5M9 372 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ACSM2BQ68CK6 577 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 CDC73Q6P1J9 531 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 C1orf122Q6ZSJ8 110 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 GRINAQ7Z429 371 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 GPR137CQ8N3F9 429 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 NAT8LQ8N9F0 302 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF563Q8TA94 476 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 NPRL2Q8WTW4 380 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF524Q96C55 264 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 CHMP6Q96FZ7 201 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 CLPTM1LQ96KA5 538 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 C20orf173Q96LM9 149 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 MAGEB18Q96M61 343 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 RCHY1Q96PM5 261 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ATOH8Q96SQ7 321 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 ASCL2Q99929 193 aa4.75□□□□□ -1.65
ATXN3-245ENST00000556958 MCRIP2Q9BUT9 160 aaKnown RBP4.75□□□□□ -1.65
ATXN3-245ENST00000556958 CCDC106Q9BWC9 280 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms