RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 NCBP2P52298 156 aaKnown RBP eCLIP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 STXBP1P61764 594 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 LSM11P83369 360 aaKnown RBP eCLIP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 KRT33BQ14525 404 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 GUK1Q16774 197 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CHRFAM7AQ494W8 412 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 RNASE10Q5GAN6 216 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SYT6Q5T7P8 510 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SLC48A1Q6P1K1 146 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ABHD13Q7L211 337 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 WDR53Q7Z5U6 358 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF546Q86UE3 836 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SLC30A8Q8IWU4 369 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 MFSD9Q8NBP5 474 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 NLGN4YQ8NFZ3 816 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 RHOXF1Q8NHV9 184 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PATE1Q8WXA2 126 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 YIPF6Q96EC8 236 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 OR2A14Q96R47 310 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PIGQQ9BRB3 760 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 HDHD5Q9BXW7 423 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF552Q9H707 407 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 NMNAT1Q9HAN9 279 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 NPAP1Q9NZP6 1156 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 DHCR7Q9UBM7 475 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 KCNE3Q9Y6H6 103 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SLCO1B1Q9Y6L6 691 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CEP192Q8TEP8 1941 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 OR2A25A4D2G3 310 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CXorf65A6NEN9 183 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 OR6C76A6NM76 312 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF99A8MXY4 864 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 C2CD4DB7Z1M9 353 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 RGS9O75916 674 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CNIH1O95406 144 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ZIC2O95409 532 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 FADS2O95864 444 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CBX7O95931 251 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 HMGN2P05204 90 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 IGHV4-34P06331 123 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 C8orf89P0DMQ9 161 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 DRD1P21728 446 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 THBS2P35442 1172 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 TSFMP43897 325 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CSNK1EP49674 416 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 IDH3GP51553 393 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 RPS7P62081 194 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 RBX1P62877 108 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 TSPAN31Q12999 210 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SKP2Q13309 424 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 RAB31Q13636 194 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PTGES3Q15185 160 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 P2RY14Q15391 338 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 DECR1Q16698 335 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 C14orf28Q4W4Y0 310 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 AVPI1Q5T686 147 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 LEMD1Q68G75 181 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ZC3H14Q6PJT7 736 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 TMEM64Q6YI46 380 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 AHSA2Q719I0 299 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PRSS48Q7RTY5 328 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ERASQ7Z444 233 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 HMGN2P46Q86SG4 172 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 LSRQ86X29 649 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 WDR36Q8NI36 951 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ZFAND1Q8TCF1 268 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PAQR8Q8TEZ7 354 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 LCN9Q8WX39 176 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 GAL3ST3Q96A11 431 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 TM4SF19Q96DZ7 209 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 DAZAP1Q96EP5 407 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF354BQ96LW1 612 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 WDR92Q96MX6 357 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 TECTBQ96PL2 329 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 OR2A5Q96R48 311 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 NUDT9Q9BW91 350 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 JAM3Q9BX67 310 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SLC25A18Q9H1K4 315 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 TCEAL2Q9H3H9 227 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 AMBNQ9NP70 447 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PHF11Q9UIL8 331 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 A4GNTQ9UNA3 340 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CHST2Q9Y4C5 530 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 EML5Q05BV3 1969 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 M0R036 132 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CELA2BP08218 269 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 NPSP0C0P6 89 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 SMIM10L1P0DMW3 83 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CMPK1P30085 196 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 GPR143P51810 404 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 MRPS21P82921 87 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 GPR18Q14330 331 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 COLEC12Q5KU26 742 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 TMEM236Q5W0B7 351 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PLCXD3Q63HM9 321 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 FCRL6Q6DN72 434 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 TMEM107Q6UX40 140 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 NPSR1Q6W5P4 371 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CHMP1BQ7LBR1 199 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 PRSS35Q8N3Z0 413 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms