RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 C20orf196Q8IYI0 205 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 UBE2J2Q8N2K1 259 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 WDR31Q8NA23 367 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 MOSPD2Q8NHP6 518 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 HIST1H2ACQ93077 130 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 BPIFA2Q96DR5 249 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 ASB9Q96DX5 294 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 LRR1Q96L50 414 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 LURAP1Q96LR2 239 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 EMC6Q9BV81 110 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 CADM1Q9BY67 442 aaKnown RBP8.48□□□□□ -1.05
SRP54-210ENST00000556380 ZNF226Q9NYT6 803 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 TAS2R16Q9NYV7 291 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 C6orf203Q9P0P8 240 aaPredicted RBP8.48□□□□□ -1.05
SRP54-210ENST00000556380 FAM32AQ9Y421 112 aaKnown RBP8.48□□□□□ -1.05
SRP54-210ENST00000556380 PLCE1Q9P212 2302 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 TRBV4-1A0A0J9YWV2 114 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 OR5H1A6NKK0 313 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 CDC42EP2O14613 210 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 CASKO14936 926 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 PTP4A3O75365 173 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 DNAJC8O75937 253 aaPredicted RBP8.47□□□□□ -1.05
SRP54-210ENST00000556380 OR6A2O95222 327 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 IFI30P13284 250 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 IFNGR1P15260 489 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 ZNF26P17031 533 aaPredicted RBP8.47□□□□□ -1.05
SRP54-210ENST00000556380 ITGA2P17301 1181 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 AHCYP23526 432 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 AQP2P41181 271 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 OMPP47874 163 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 LIMS1P48059 325 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 HMGA2P52926 109 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 RPS4XP62701 263 aaKnown RBP8.47□□□□□ -1.05
SRP54-210ENST00000556380 RPL18Q07020 188 aaKnown RBP8.47□□□□□ -1.05
SRP54-210ENST00000556380 TIMM23BQ5SRD1 257 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 ZNF730Q6ZMV8 503 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 P2RY8Q86VZ1 359 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 CDC20BQ86Y33 519 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 LRRC75AQ8NAA5 344 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 OR6X1Q8NH79 312 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 ZC3HAV1LQ96H79 300 aaKnown RBP8.47□□□□□ -1.05
SRP54-210ENST00000556380 TNFRSF13CQ96RJ3 184 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 SEPHS2Q99611 448 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 GPA33Q99795 319 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 MAGIXQ9H6Y5 334 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 PLEKHF2Q9H8W4 249 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 GPR35Q9HC97 309 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 MED29Q9NX70 200 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 UPB1Q9UBR1 384 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 HIF3AQ9Y2N7 669 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 SLC25A15Q9Y619 301 aa8.47□□□□□ -1.05
SRP54-210ENST00000556380 SH3PXD2BA1X283 911 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 NPIPB13A6NJU9 1138 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 AQP12BA6NM10 295 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 NPIPB4C9JG80 1138 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 C11orf98E9PRG8 122 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 BLOC1S5-TXNDC5H3BN57 136 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 RNF13O43567 381 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 SLC43A1O75387 559 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 ATP5HO75947 161 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 FABP3P05413 133 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 UMPSP11172 480 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 DNAJA1P31689 397 aaKnown RBP8.46□□□□□ -1.06
SRP54-210ENST00000556380 SMIM11AP58511 58 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 IL1RL1Q01638 556 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 RUNX1T1Q06455 604 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 BEX5Q5H9J7 111 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 ARMC4Q5T2S8 1044 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 C9orf135Q5VTT2 229 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 OR7E24Q6IFN5 339 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 LRFN4Q6PJG9 635 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 SLC35D2Q76EJ3 337 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 NANOGNBQ7Z5D8 188 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 ZER1Q7Z7L7 766 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 SYT9Q86SS6 491 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 ZDHHC21Q8IVQ6 265 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 AQP12AQ8IXF9 295 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 ADGRG5Q8IZF4 528 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 C1orf162Q8NEQ5 155 aaPredicted RBP8.46□□□□□ -1.06
SRP54-210ENST00000556380 BCL2L2Q92843 193 aaPredicted RBP8.46□□□□□ -1.06
SRP54-210ENST00000556380 TMEM54Q969K7 222 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 MCUR1Q96AQ8 359 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 CCDC124Q96CT7 223 aaKnown RBP8.46□□□□□ -1.06
SRP54-210ENST00000556380 ALKBH3Q96Q83 286 aaPredicted RBP8.46□□□□□ -1.06
SRP54-210ENST00000556380 ZNF347Q96SE7 839 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 TMEM204Q9BSN7 226 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 MRPL13Q9BYD1 178 aaKnown RBP8.46□□□□□ -1.06
SRP54-210ENST00000556380 CLEC4MQ9H2X3 399 aaPredicted RBP8.46□□□□□ -1.06
SRP54-210ENST00000556380 NELFAQ9H3P2 528 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 SLC17A5Q9NRA2 495 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 POMPQ9Y244 141 aa8.46□□□□□ -1.06
SRP54-210ENST00000556380 ITPR3Q14573 2671 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 CIB4A0PJX0 185 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 DPRXA6NFQ7 191 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 ZNF726A6NNF4 738 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 EFCAB9A8MZ26 197 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 ZNF587BE7ETH6 402 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 CLOCKO15516 846 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 AKAP8O43823 692 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms