RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ZNF100Q8IYN0 542 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 GPR137CQ8N3F9 429 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 ARIH2OSQ8N7S6 290 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 SDR9C7Q8NEX9 313 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 NOXO1Q8NFA2 376 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 OR52E2Q8NGJ4 325 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 OR6N1Q8NGY5 312 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 OR2T4Q8NH00 348 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 TMEM163Q8TC26 289 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 ABHD3Q8WU67 409 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 ASB10Q8WXI3 467 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 RASD2Q96D21 266 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 SLC25A44Q96H78 314 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-220ENST00000555634 TSPAN32Q96QS1 320 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 SNX18Q96RF0 628 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 ALG12Q9BV10 488 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 RNF122Q9H9V4 155 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 CLCF1Q9UBD9 225 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.99□□□□□ -0.81
SHMT2-220ENST00000555634 ADAM18Q9Y3Q7 739 aa9.99□□□□□ -0.81
SHMT2-220ENST00000555634 ATMQ13315 3056 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 IGKV3D-15A0A087WSY6 115 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 MS4A18H0YCH9 400 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 TP53P04637 393 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-220ENST00000555634 CRHP06850 196 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 YES1P07947 543 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 MYF6P23409 242 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 CSNK1A1P48729 337 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 CENPAP49450 140 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 ZNF84P51523 738 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 CSNK2BP67870 215 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 MS4A18Q3C1V0 323 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 ARMC4Q5T2S8 1044 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 TMEM211Q6ICI0 200 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 NIPAL3Q6P499 406 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 CREB3L2Q70SY1 520 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 CXXC5Q7LFL8 322 aaKnown RBP9.98□□□□□ -0.81
SHMT2-220ENST00000555634 CCDC103Q8IW40 242 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 TCEANCQ8N8B7 351 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 CNEP1R1Q8N9A8 125 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 PROKR2Q8NFJ6 384 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 OR4Q3Q8NH05 313 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 OR4K13Q8NH42 304 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 OR6X1Q8NH79 312 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 TMEM45BQ96B21 275 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 APH1AQ96BI3 265 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 INTS12Q96CB8 462 aaKnown RBP9.98□□□□□ -0.81
SHMT2-220ENST00000555634 Q96M85 177 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 MUS81Q96NY9 551 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 RBP7Q96R05 134 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 MYCBPQ99417 103 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-220ENST00000555634 BCO1Q9HAY6 547 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 RASSF1Q9NS23 344 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 MED29Q9NX70 200 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 SCN3BQ9NY72 215 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 FLVCR1Q9Y5Y0 555 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 MED12LQ86YW9 2145 aa9.98□□□□□ -0.81
SHMT2-220ENST00000555634 SPTA1P02549 2419 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 ZGRF1Q86YA3 2104 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 PRSS37A4D1T9 235 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 SH3D21A4FU49 640 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 SLC22A31A6NKX4 558 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 DLGAP1O14490 977 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 PRODHO43272 600 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 DENRO43583 198 aaKnown RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 TRAF3IP2O43734 574 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 TLX2O43763 284 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 SS18L1O75177 396 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 IGFBP1P08833 259 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 HIST1H1CP16403 213 aaKnown RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 AGTR1P30556 359 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 ATP6V1E1P36543 226 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 POLR2IP36954 125 aaKnown RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 P2RY4P51582 365 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 MLLT10P55197 1068 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 FXYD6P3P58550 94 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 SNRPGP62308 76 aaKnown RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 POU4F2Q12837 409 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 FHL1Q13642 323 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 KLHL12Q53G59 568 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 MESTQ5EB52 335 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 NXNL2Q5VZ03 156 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 MTFR2Q6P444 385 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 RPTNQ6XPR3 784 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 Q6ZPB1 254 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 FAM122BQ7Z309 247 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 CHERPQ8IWX8 916 aaKnown RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 UBE2J2Q8N2K1 259 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 KDM8Q8N371 416 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 LRRC75AQ8NAA5 344 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 POMGNT2Q8NAT1 580 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 ZNF519Q8TB69 540 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 LRR1Q96L50 414 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 IL4I1Q96RQ9 567 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 ULBP2Q9BZM5 246 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 B3GAT1Q9P2W7 334 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 UPB1Q9UBR1 384 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 ZNF346Q9UL40 294 aaKnown RBP9.97□□□□□ -0.81
SHMT2-220ENST00000555634 ZFYVE26Q68DK2 2539 aa9.97□□□□□ -0.81
SHMT2-220ENST00000555634 MAST4O15021 2626 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms