RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 FBXW5Q969U6 566 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 C7orf34Q96L11 122 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 CDRT15Q96T59 188 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 NOX3Q9HBY0 568 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 DCAF13Q9NV06 445 aaKnown RBP11.93□□□□□ -0.5
SNX6-203ENST00000555416 CISD1Q9NZ45 108 aaKnown RBP11.93□□□□□ -0.5
SNX6-203ENST00000555416 LAMP3Q9UQV4 416 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 MAGED1Q9Y5V3 778 aaPredicted RBP11.93□□□□□ -0.5
SNX6-203ENST00000555416 V9GYQ6 96 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 MTORP42345 2549 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 A0A087WUU8 490 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 ARPC4-TTLL3A0A0A6YYG9 625 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 IGHV1-18A0A0C4DH31 117 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 OVOL3O00110 214 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 NDUFAB1O14561 156 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 OR6A2O95222 327 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 HIST1H2ABP04908 130 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 CELA3BP08861 270 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 TSPAN19P0C672 248 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 T-ENOLP0DO92 83 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 HSD17B1P14061 328 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 PTAFRP25105 342 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 PTH2RP49190 550 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 ST3GAL3Q11203 375 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 IQCCQ4KMZ1 466 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 LRFN4Q6PJG9 635 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 SLC22A25Q6T423 547 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 KLHL17Q6TDP4 642 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 HIST3H2AQ7L7L0 130 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 SSX8Q7RTT4 187 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 NRMQ8IXM6 262 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 DEFB107AQ8IZN7 70 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 ANKK1Q8NFD2 765 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 MAGEE2Q8TD90 523 aaPredicted RBP11.92□□□□□ -0.5
SNX6-203ENST00000555416 LIPHQ8WWY8 451 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 HTRA1Q92743 480 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 HIST1H2ACQ93077 130 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 TMEM54Q969K7 222 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 LRR1Q96L50 414 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 HS6ST2Q96MM7 605 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 FNDC11Q9BVV2 318 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 DLL4Q9NR61 685 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 NDUFAF4Q9P032 175 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 MED31Q9Y3C7 131 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 ENPP4Q9Y6X5 453 aa11.92□□□□□ -0.5
SNX6-203ENST00000555416 ZNF726A6NNF4 738 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 ZNF99A8MXY4 864 aaPredicted RBP11.91□□□□□ -0.5
SNX6-203ENST00000555416 ATP6V1G2-DDX39BF2Z307 99 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 AKAP8O43823 692 aaKnown RBP11.91□□□□□ -0.5
SNX6-203ENST00000555416 DIRAS1O95057 198 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 IGF2P01344 180 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 IFI30P13284 250 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 VLDLRP98155 873 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 KRT72Q14CN4 511 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 TRAM2Q15035 370 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 Q5PR19 223 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 KLHL24Q6TFL4 600 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 LRRC75A-AS1Q8N1F1 130 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 OR6N1Q8NGY5 312 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 OR6X1Q8NH79 312 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 FGFBP3Q8TAT2 258 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 TMEM171Q8WVE6 324 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 BPIFA2Q96DR5 249 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 SLC38A2Q96QD8 506 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 GSX2Q9BZM3 304 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 ULBP2Q9BZM5 246 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 HEATR1Q9H583 2144 aaKnown RBP11.91□□□□□ -0.5
SNX6-203ENST00000555416 NMNAT1Q9HAN9 279 aaPredicted RBP11.91□□□□□ -0.5
SNX6-203ENST00000555416 ZNF701Q9NV72 531 aaPredicted RBP11.91□□□□□ -0.5
SNX6-203ENST00000555416 ZNF224Q9NZL3 707 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 CRNNQ9UBG3 495 aaPredicted RBP11.91□□□□□ -0.5
SNX6-203ENST00000555416 ADAM21Q9UKJ8 722 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 MOKQ9UQ07 419 aa11.91□□□□□ -0.5
SNX6-203ENST00000555416 hCG_2039718K7EN88 272 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 CDC42EP2O14613 210 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 ARPC2O15144 300 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 NDUFS7O75251 213 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 WNT11O96014 354 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 IGLV1-44P01699 117 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 HLA-HP01893 362 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 SEMG1P04279 462 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 CECR9P0C854 216 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 PGA4P0DJD7 388 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 PGA3P0DJD8 388 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 CD99P14209 185 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 B4GALT1P15291 398 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 ZNF26P17031 533 aaPredicted RBP11.9□□□□□ -0.5
SNX6-203ENST00000555416 CALCRP30988 508 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 CDKN1AP38936 164 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 CSNK1A1P48729 337 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 SH3BGRP55822 239 aaPredicted RBP11.9□□□□□ -0.5
SNX6-203ENST00000555416 UBE2NP61088 152 aaKnown RBP11.9□□□□□ -0.5
SNX6-203ENST00000555416 MYBPC1Q00872 1141 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 PRKCDQ05655 676 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 SAMD4BQ5PRF9 694 aaKnown RBP11.9□□□□□ -0.5
SNX6-203ENST00000555416 GKAP1Q5VSY0 366 aaPredicted RBP11.9□□□□□ -0.5
SNX6-203ENST00000555416 RINLQ6ZS11 566 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 DTX2Q86UW9 622 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 IGFN1Q86VF2 1251 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms