RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 KRT34O76011 436 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 MT-ND1P03886 318 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 HLA-DOBP13765 273 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 SLC25A16P16260 332 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 CBLP22681 906 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 AHCYP23526 432 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 SERPINF1P36955 418 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 MST1LQ2TV78 715 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 NRN1LQ496H8 165 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 PIWIL3Q7Z3Z3 882 aaKnown RBP10.29□□□□□ -0.76
VRK1-204ENST00000555351 HDDC2Q7Z4H3 204 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 TSPYL5Q86VY4 417 aaPredicted RBP10.29□□□□□ -0.76
VRK1-204ENST00000555351 CARM1Q86X55 608 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 OR2T12Q8NG77 320 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 OR6N1Q8NGY5 312 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 NANOS1Q8WY41 292 aaKnown RBP10.29□□□□□ -0.76
VRK1-204ENST00000555351 SLC25A44Q96H78 314 aaPredicted RBP10.29□□□□□ -0.76
VRK1-204ENST00000555351 HOPXQ9BPY8 73 aaPredicted RBP10.29□□□□□ -0.76
VRK1-204ENST00000555351 ULBP2Q9BZM5 246 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 MYOZ1Q9NP98 299 aaPredicted RBP10.29□□□□□ -0.76
VRK1-204ENST00000555351 TAS2R5Q9NYW4 299 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 POFUT2Q9Y2G5 429 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 SH3GLB1Q9Y371 365 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 HEATR1Q9H583 2144 aaKnown RBP10.28□□□□□ -0.76
VRK1-204ENST00000555351 ELOVL7A1L3X0 281 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 NPIPB13A6NJU9 1138 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 NPIPB4C9JG80 1138 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 NDUFS8O00217 210 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 SSX4O60224 188 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 CH25HO95992 272 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 F12P00748 615 aaPredicted RBP10.28□□□□□ -0.76
VRK1-204ENST00000555351 TSPAN19P0C672 248 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 IFNGR1P15260 489 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 IFNA8P32881 189 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 CSNK1A1P48729 337 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 SNRPD2P62316 118 aaKnown RBP10.28□□□□□ -0.76
VRK1-204ENST00000555351 SELENOWP63302 87 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 PPP2R2BQ00005 443 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 KRTAP1-1Q07627 177 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 CYBRD1Q53TN4 286 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 PHYHD1Q5SRE7 291 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 HACD2Q6Y1H2 254 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 Q71RC1 249 aaPredicted RBP10.28□□□□□ -0.76
VRK1-204ENST00000555351 SLC35D2Q76EJ3 337 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 DPPA2Q7Z7J5 298 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 MICU2Q8IYU8 434 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 LZICQ8WZA0 190 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 TMEM54Q969K7 222 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 ZNF566Q969W8 418 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 ZNF837Q96EG3 531 aaPredicted RBP10.28□□□□□ -0.76
VRK1-204ENST00000555351 TXNDC15Q96J42 360 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 FOXB1Q99853 325 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 EMC6Q9BV81 110 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 MEPEQ9NQ76 525 aaPredicted RBP10.28□□□□□ -0.76
VRK1-204ENST00000555351 MED29Q9NX70 200 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 STX18Q9P2W9 335 aaKnown RBP10.28□□□□□ -0.76
VRK1-204ENST00000555351 RIMS3Q9UJD0 308 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 FKBP7Q9Y680 259 aa10.28□□□□□ -0.76
VRK1-204ENST00000555351 IGHV2OR16-5A0A0B4J2B6 119 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 RNF13O43567 381 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 UBL3O95164 117 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 TP53P04637 393 aaPredicted RBP10.27□□□□□ -0.77
VRK1-204ENST00000555351 EVX1P49640 407 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 PPOXP50336 477 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 BIDP55957 195 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 TAS2R41P59536 307 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 LOXL1Q08397 574 aaPredicted RBP10.27□□□□□ -0.77
VRK1-204ENST00000555351 ST3GAL3Q11203 375 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 CAMK2DQ13557 499 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 ADIPOQQ15848 244 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 HIST3H3Q16695 136 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 GSG1Q2KHT4 349 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 C8orf82Q6P1X6 216 aaPredicted RBP10.27□□□□□ -0.77
VRK1-204ENST00000555351 ZNF813Q6ZN06 617 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 SLC46A3Q7Z3Q1 461 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 NANOGNBQ7Z5D8 188 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 MDP1Q86V88 176 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 TMEM239Q8WW34 195 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 RCN3Q96D15 328 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 FBXO17Q96EF6 278 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 ZNF75AQ96N20 296 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 SEPHS2Q99611 448 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 PLK3Q9H4B4 646 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 EFCAB1Q9HAE3 211 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 GLTPQ9NZD2 209 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 ZANQ9Y493 2812 aa10.27□□□□□ -0.77
VRK1-204ENST00000555351 NAV3Q8IVL0 2385 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 HIVEP2P31629 2446 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 A0A096LNT2 108 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 A0A1W2PRG6 482 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 ZNF503-AS2A6NEH8 195 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 C11orf98E9PRG8 122 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 CD5LO43866 347 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 OR7A10O76100 309 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 BCL10O95999 233 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 IGHG1P01857 330 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 OR4A8P0C604 315 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 PGA4P0DJD7 388 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 PGA3P0DJD8 388 aa10.26□□□□□ -0.77
VRK1-204ENST00000555351 NR2C1P13056 603 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms