RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 UBE2J2Q8N2K1 259 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 ASB10Q8WXI3 467 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 ZNF566Q969W8 418 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 EME1Q96AY2 570 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 SLC25A44Q96H78 314 aaPredicted RBP12.64□□□□□ -0.39
CHD8-208ENST00000555301 LRR1Q96L50 414 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 SAMD8Q96LT4 415 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 CIB1Q99828 191 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 EMC6Q9BV81 110 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 IFT27Q9BW83 186 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 LINC00470Q9BZP3 86 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 EGLN3Q9H6Z9 239 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 KRT84Q9NSB2 600 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 ELOVL5Q9NYP7 299 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 UPB1Q9UBR1 384 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 MALT1Q9UDY8 824 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 IL20RAQ9UHF4 553 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 ENOPH1Q9UHY7 261 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 FOXD3Q9UJU5 478 aaPredicted RBP12.64□□□□□ -0.39
CHD8-208ENST00000555301 ZNF346Q9UL40 294 aaKnown RBP12.64□□□□□ -0.39
CHD8-208ENST00000555301 PDLIM1O00151 329 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 IMPA2O14732 288 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 ARPC3O15145 178 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 IDH3BO43837 385 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 KRT33AO76009 404 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 SOX14O95416 240 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 IGHG1P01857 330 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 NR2C1P13056 603 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 ACADSP16219 412 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 IGFBP5P24593 272 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 SDHAP31040 664 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 PPP2R2BQ00005 443 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 TOP3AQ13472 1001 aaPredicted RBP12.63□□□□□ -0.39
CHD8-208ENST00000555301 CAMK2DQ13557 499 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 SLC36A3Q495N2 470 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 TSPO2Q5TGU0 170 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 Q6ZT83 130 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.63□□□□□ -0.39
CHD8-208ENST00000555301 FAM122BQ7Z309 247 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 TMEM123Q8N131 208 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 ARIH2OSQ8N7S6 290 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 OR2T33Q8NG76 320 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 OR6N1Q8NGY5 312 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 TEX47Q8TBZ9 253 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 FNDC8Q8TC99 324 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 ZNF570Q96NI8 536 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 TSPAN32Q96QS1 320 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 RBM24Q9BX46 236 aaKnown RBP12.63□□□□□ -0.39
CHD8-208ENST00000555301 TSSK6Q9BXA6 273 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 ENKD1Q9H0I2 346 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 SMURF2Q9HAU4 748 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 B3GAT2Q9NPZ5 323 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 TBC1D23Q9NUY8 699 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 ASB6Q9NWX5 421 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 USE1Q9NZ43 259 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 REV1Q9UBZ9 1251 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 PRSS50Q9UI38 385 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 BAIAP2Q9UQB8 552 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 ADAM18Q9Y3Q7 739 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 IER3IP1Q9Y5U9 82 aa12.63□□□□□ -0.39
CHD8-208ENST00000555301 KIAA1549Q9HCM3 1950 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 NKX2-6A6NCS4 301 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 XKRYO14609 159 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 TXNDC12O95881 172 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 IGHV3-9P01782 118 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 TP53P04637 393 aaPredicted RBP12.62□□□□□ -0.39
CHD8-208ENST00000555301 EDNRAP25101 427 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 NOS3P29474 1203 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 ACVR1BP36896 505 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 CSNK1A1P48729 337 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 PCYT1AP49585 367 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 ALDH3A2P51648 485 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 CLRN1P58418 232 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 ESRRGP62508 458 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 DAG1Q14118 895 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 P2RY6Q15077 328 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 CDSNQ15517 529 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 TRIP10Q15642 601 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 CLEC12AQ5QGZ9 265 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 CARD17Q5XLA6 110 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 ANKRD34AQ69YU3 496 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 ZNF474Q6S9Z5 364 aaPredicted RBP12.62□□□□□ -0.39
CHD8-208ENST00000555301 ZBTB49Q6ZSB9 765 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 C20orf196Q8IYI0 205 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 GPR137CQ8N3F9 429 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 CBR4Q8N4T8 237 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 ZNF519Q8TB69 540 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 MAGEE2Q8TD90 523 aaPredicted RBP12.62□□□□□ -0.39
CHD8-208ENST00000555301 RNASE6Q93091 150 aaKnown RBP12.62□□□□□ -0.39
CHD8-208ENST00000555301 Q96M85 177 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 ERMAPQ96PL5 475 aaPredicted RBP12.62□□□□□ -0.39
CHD8-208ENST00000555301 ALG12Q9BV10 488 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 PLA2G12AQ9BZM1 189 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 C8orf4Q9NR00 106 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 SLC7A10Q9NS82 523 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 RRP15Q9Y3B9 282 aaKnown RBP12.62□□□□□ -0.39
CHD8-208ENST00000555301 ORC6Q9Y5N6 252 aa12.62□□□□□ -0.39
CHD8-208ENST00000555301 TEX13CA0A0J9YWL9 993 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 ZNF587BE7ETH6 402 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms