RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 OR1F1O43749 312 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 MOSPD3O75425 235 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 RBBP9O75884 186 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 FGF19O95750 216 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 HOXB5P09067 269 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 C6P13671 934 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 TPT1P13693 172 aaKnown RBP14.31□□□□□ -0.12
SYNE3-203ENST00000554873 NME1P15531 152 aaKnown RBP14.31□□□□□ -0.12
SYNE3-203ENST00000554873 HOXA5P20719 270 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 CDK2P24941 298 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 S100A2P29034 98 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 NCBP2P52298 156 aaKnown RBP eCLIP14.31□□□□□ -0.12
SYNE3-203ENST00000554873 TAS2R20P59543 309 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 DEFB103AP81534 67 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ELAVL1Q15717 326 aaKnown RBP14.31□□□□□ -0.12
SYNE3-203ENST00000554873 CDPF1Q6NVV7 123 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 LPCAT3Q6P1A2 487 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ETV3LQ6ZN32 361 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF620Q6ZNG0 422 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ANGPTL5Q86XS5 388 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 OR5M8Q8NGP6 311 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 HAVCR1Q96D42 359 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ZG16BQ96DA0 208 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 CAMK1GQ96NX5 476 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 CHST6Q9GZX3 395 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 SFXN1Q9H9B4 322 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 GDE1Q9NZC3 331 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 PISDQ9UG56 409 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 A0A1B0GTI1 187 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 CXorf65A6NEN9 183 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 FGBP02675 491 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 REEP5Q00765 189 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 LASP1Q14847 261 aaKnown RBP14.3□□□□□ -0.12
SYNE3-203ENST00000554873 ATXN7L3Q14CW9 347 aaPredicted RBP14.3□□□□□ -0.12
SYNE3-203ENST00000554873 KRBOX4Q5JUW0 171 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 KLK6Q92876 244 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 ARRDC3Q96B67 414 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 C16orf58Q96GQ5 468 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF764Q96H86 408 aaPredicted RBP14.3□□□□□ -0.12
SYNE3-203ENST00000554873 SOX7Q9BT81 388 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 MED20Q9H944 212 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 RPS10P5Q9NQ39 176 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 TAS2R8Q9NYW2 309 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 IL20RAQ9UHF4 553 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 GPR55Q9Y2T6 319 aaPredicted RBP14.3□□□□□ -0.12
SYNE3-203ENST00000554873 COL4A3Q01955 1670 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 IDSB3KWA1 339 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 RNASEK-C17orf49H0YIS7 233 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 KIAA0355O15063 1070 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 TMEM127O75204 238 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 ERGP11308 486 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 CAV2P51636 162 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF750Q32MQ0 723 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 OR4C11Q6IEV9 310 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 NDUFAF7Q7L592 441 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 DPPA2Q7Z7J5 298 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 LRRTM4Q86VH4 590 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 SLC30A7Q8NEW0 376 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 OR10R2Q8NGX6 335 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 KISS1RQ969F8 398 aaPredicted RBP14.3□□□□□ -0.12
SYNE3-203ENST00000554873 PIK3IP1Q96FE7 263 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 NECAB3Q96P71 396 aaPredicted RBP14.3□□□□□ -0.12
SYNE3-203ENST00000554873 ELF4Q99607 663 aaPredicted RBP14.3□□□□□ -0.12
SYNE3-203ENST00000554873 CHST5Q9GZS9 411 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 AICDAQ9GZX7 198 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 ZBP1Q9H171 429 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 ANKRD10Q9NXR5 420 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 TP53TG5Q9Y2B4 290 aa14.3□□□□□ -0.12
SYNE3-203ENST00000554873 H7C417 338 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 HMGN2P05204 90 aaKnown RBP14.29□□□□□ -0.12
SYNE3-203ENST00000554873 CSF1P09603 554 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 NDUFV2P19404 249 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 MAGEB1P43366 347 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 KHKP50053 298 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 STXBP1P61764 594 aaKnown RBP14.29□□□□□ -0.12
SYNE3-203ENST00000554873 MST1LQ2TV78 715 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 LRRC37A5PQ49AS3 106 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 TCEAL6Q6IPX3 200 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 PWWP2BQ6NUJ5 590 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 MAMDC2Q7Z304 686 aaPredicted RBP14.29□□□□□ -0.12
SYNE3-203ENST00000554873 INO80EQ8NBZ0 244 aaPredicted RBP14.29□□□□□ -0.12
SYNE3-203ENST00000554873 SUN3Q8TAQ9 357 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 TM7SF3Q9NS93 570 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 MTFP1Q9UDX5 166 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 A0A0A6YYD5 115 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 A0A1W2PPV9 198 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 CPSF4LA6NMK7 179 aaKnown RBP14.29□□□□□ -0.12
SYNE3-203ENST00000554873 F8VVB4 439 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 F8VWA3 439 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 STMND1H3BQB6 276 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 STATHP02808 62 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 AKR1C3P42330 323 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 CDX1P47902 265 aaPredicted RBP14.29□□□□□ -0.12
SYNE3-203ENST00000554873 PKIAP61925 76 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF85Q03923 595 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF697Q5TEC3 545 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 PRPF38BQ5VTL8 546 aaKnown RBP14.29□□□□□ -0.12
SYNE3-203ENST00000554873 FIGNL1Q6PIW4 674 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF793Q6ZN11 406 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 CA5BP1Q8WTZ4 195 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms