RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 IDO1P14902 403 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 HOXB9P17482 250 aaPredicted RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 CRYGSP22914 178 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 AGTR1P30556 359 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 SFTPDP35247 375 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 UGT2B10P36537 528 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 CD79BP40259 229 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 CCR4P51679 360 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 ART1P52961 327 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 MVDP53602 400 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 SELENBP1Q13228 472 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 CBFBQ13951 182 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 GPR68Q15743 365 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 SGCBQ16585 318 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 GSTA3Q16772 222 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 FAM90A2PQ658T7 463 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 HBMQ6B0K9 141 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 CCDC144NLQ6NUI1 221 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 EPGNQ6UW88 154 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 TFAP2EQ6VUC0 442 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 DEF8Q6ZN54 512 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 MSANTD1Q6ZTZ1 278 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 PLEKHM3Q6ZWE6 761 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 FAM57BQ71RH2 274 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF550Q7Z398 422 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 C16orf62Q7Z3J2 963 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 HMGN2P46Q86SG4 172 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 TMCO5AQ8N6Q1 288 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 ANKFN1Q8N957 763 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 OR9I1Q8NGQ6 314 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 RFWD2Q8NHY2 731 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 ROBO4Q8WZ75 1007 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 ST8SIA1Q92185 356 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF75CPQ92670 426 aaPredicted RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 GMPPAQ96IJ6 420 aaPredicted RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 ATP6V1G3Q96LB4 118 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 C7orf26Q96N11 449 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 WFIKKN1Q96NZ8 548 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 FOXC2Q99958 501 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 THUMPD3Q9BV44 507 aaKnown RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 FAM234AQ9H0X4 552 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 SLC38A1Q9H2H9 487 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 MOV10Q9HCE1 1003 aaKnown RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 SLCO1B3Q9NPD5 702 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 EXOSC3Q9NQT5 275 aaKnown RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 POLE3Q9NRF9 147 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 SDR39U1Q9NRG7 319 aaPredicted RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 SLC6A13Q9NSD5 602 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 ACER3Q9NUN7 267 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 EXD2Q9NVH0 621 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 NKIRAS1Q9NYS0 192 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 C6orf203Q9P0P8 240 aaPredicted RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 MKLN1Q9UL63 735 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 MCTS1Q9ULC4 181 aaKnown RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 PCDHGB4Q9UN71 923 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 WDR45Q9Y484 360 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 USH1CQ9Y6N9 552 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 DSPPQ9NZW4 1301 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 ITPR3Q14573 2671 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 DSCAMO60469 2012 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 PLCE1Q9P212 2302 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 IGHV3-15A0A0B4J1V0 119 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 FAM234BA2RU67 622 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 AGAP5A6NIR3 686 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 GJE1A6NN92 205 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 C16orf97H3BN30 126 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 GTPBP1O00178 669 aaKnown RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 RFXANKO14593 260 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 AP3D1O14617 1153 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 SMAD9O15198 467 aaKnown RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 KCNAB3O43448 404 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 DIAPH2O60879 1101 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 GCM2O75603 506 aaPredicted RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 SLC22A3O75751 556 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 KRT75O95678 551 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 NUDT14O95848 222 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CSTAP01040 98 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 RAF1P04049 648 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 IL6P05231 212 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 ZCCHC18P0CG32 403 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CD1EP15812 388 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 H2AFXP16104 143 aaPredicted RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CD53P19397 219 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 PGCP20142 388 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 ME2P23368 584 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 EDNRAP25101 427 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 DUSP1P28562 367 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CHI3L1P36222 383 aaPredicted RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 MAGEA8P43361 318 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CTBP2P56545 445 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CARD18P57730 90 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 HPCAP84074 193 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 LRRC74AQ0VAA2 488 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 SYPL1Q16563 259 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 EXOC3L2Q2M3D2 409 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 TMEM176BQ3YBM2 270 aaPredicted RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 GPAT3Q53EU6 434 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 SYT14P1Q58G82 188 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 PDSS1Q5T2R2 415 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 MRPL2Q5T653 305 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms