RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 PAPD4Q6PIY7 484 aaKnown RBP10.61□□□□□ -0.71
SHMT2-212ENST00000554467 KLHL36Q8N4N3 616 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF485Q8NCK3 441 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 APCDD1LQ8NCL9 501 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 C19orf18Q8NEA5 215 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF431Q8TF32 576 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-212ENST00000554467 UFD1Q92890 307 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 SLC25A46Q96AG3 418 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 SLC25A36Q96CQ1 311 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 Q96M85 177 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 DPCDQ9BVM2 203 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-212ENST00000554467 ASB6Q9NWX5 421 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 KCNMB2Q9Y691 235 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 HPGDSO60760 199 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 SSTR2P30874 369 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 EMP2P54851 167 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF273Q14593 569 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF57Q68EA5 555 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF322Q6U7Q0 402 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-212ENST00000554467 MARCH9Q86YJ5 346 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 GID4Q8IVV7 300 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 ACBD7Q8N6N7 88 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 OR11H7Q8NGC8 314 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 OR6K6Q8NGW6 343 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 TIMP4Q99727 224 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 CRB3Q9BUF7 120 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 NANSQ9NR45 359 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 CHRNA9Q9UGM1 479 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 EXOGQ9Y2C4 368 aaKnown RBP10.61□□□□□ -0.71
SHMT2-212ENST00000554467 TEX13CA0A0J9YWL9 993 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 SHISA8B8ZZ34 492 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 J3QLW9 94 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 ALOX12BO75342 701 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 HLA-DQB1P01920 261 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF19P17023 458 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 BIKQ13323 160 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 FCN2Q15485 313 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 MAMSTRQ6ZN01 415 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 RABEPKQ7Z6M1 372 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 METTL21AQ8WXB1 218 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 TAAR8Q969N4 342 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 REG4Q9BYZ8 158 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 SHARPINQ9H0F6 387 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 A0A0A6YYJ9 748 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 OR6C68A6NDL8 312 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 C11orf98E9PRG8 122 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 PLGP00747 810 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-212ENST00000554467 IGHA1P01876 353 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 CELA2AP08217 269 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 PYCR1P32322 319 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 OR12D2P58182 307 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 LGALSLQ3ZCW2 172 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-212ENST00000554467 RPL13AP3Q6NVV1 102 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 IL20RBQ6UXL0 311 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 PLPP5Q8NEB5 264 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 CEP76Q8TAP6 659 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 SMPDL3BQ92485 455 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 RBPMSQ93062 196 aaKnown RBP10.6□□□□□ -0.71
SHMT2-212ENST00000554467 OR11A1Q9GZK7 315 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 PPP1R3EQ9H7J1 279 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 ADGRL4Q9HBW9 690 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 MRTO4Q9UKD2 239 aaKnown RBP10.6□□□□□ -0.71
SHMT2-212ENST00000554467 GSTK1Q9Y2Q3 226 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 FCER2P06734 321 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 GUSBP08236 651 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 PNLIPP16233 465 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 CLLU1Q5K131 121 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 RNLSQ5VYX0 342 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 VASNQ6EMK4 673 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 ARL9Q6T311 187 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 ASB18Q6ZVZ8 466 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 NAT6Q93015 286 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 FOXN4Q96NZ1 517 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 ARRDC1-AS1Q9H2J1 176 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 ICAM5Q9UMF0 924 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 SF3B6Q9Y3B4 125 aaKnown RBP10.6□□□□□ -0.71
SHMT2-212ENST00000554467 HRH3Q9Y5N1 445 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 LOC400499M0QZD8 3231 aa10.6□□□□□ -0.71
SHMT2-212ENST00000554467 URB1O60287 2271 aaKnown RBP10.6□□□□□ -0.71
SHMT2-212ENST00000554467 IRGMA1A4Y4 181 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 J3QRE1 110 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 TOX3O15405 576 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SELENOFO60613 162 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SBK2P0C263 348 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SLC2A2P11168 524 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-212ENST00000554467 GRK6P43250 576 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 E2F1Q01094 437 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SLC3A1Q07837 685 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF74Q16587 644 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 TP53I3Q53FA7 332 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 FAM27D1Q5T7N8 215 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 LCN1P1Q5VSP4 162 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 ARHGAP11AQ6P4F7 1023 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 LURAP1LQ8IV03 231 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SLITRK4Q8IW52 837 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 NEIL3Q8TAT5 605 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 C4orf36Q96KX1 117 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SPSB2Q99619 263 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SOSTQ9BQB4 213 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 WACQ9BTA9 647 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms