RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 HMGN1P05114 100 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 PSMD4P55036 377 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 ZNF85Q03923 595 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 GRK1Q15835 563 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 C16orf47Q6ZP98 133 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 RTL4Q6ZR62 310 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 TMPRSS11FQ6ZWK6 438 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 COX15Q7KZN9 410 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 NLRC3Q7RTR2 1065 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 TMEM105Q8N8V8 129 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 GHSRQ92847 366 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 HGDQ93099 445 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 ADIPOR1Q96A54 375 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 KCTD12Q96CX2 325 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 NXPE2Q96DL1 559 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 WDR89Q96FK6 387 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 ARPC5LQ9BPX5 153 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 BRD7Q9NPI1 651 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 RARRES3Q9UL19 164 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 SIGLEC7Q9Y286 467 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 BHLHE40O14503 412 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 GMDSO60547 372 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 MT-ND5P03915 603 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 PYCR1P32322 319 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 HSF2Q03933 536 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 NKAIN1Q4KMZ8 207 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 CLLU1Q5K131 121 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 CDH24Q86UP0 819 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 GID4Q8IVV7 300 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 FTMTQ8N4E7 242 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 MS4A15Q8N5U1 240 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 ADAMTS14Q8WXS8 1223 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 RTN4RQ9BZR6 473 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 CLEC4MQ9H2X3 399 aaPredicted RBP13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 OCIAD1Q9NX40 245 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 UBQLN2Q9UHD9 624 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 SRPK3Q9UPE1 567 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 TRABD2BA6NFA1 517 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 PLPP2O43688 288 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 ICOSLGO75144 302 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 RCBTB2O95199 551 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 IL33O95760 270 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 PEPDP12955 493 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 GXYLT1Q4G148 440 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 FAM69BQ5VUD6 431 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 PXKQ7Z7A4 578 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 DDOQ99489 341 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 TEAD3Q99594 435 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 KLHDC3Q9BQ90 382 aa13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 AKIRIN1Q9H9L7 192 aaPredicted RBP13.33□□□□□ -0.28
PPP4R3A-201ENST00000554308 IFNA7P01567 189 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 RAB3BP20337 219 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 IL12BP29460 328 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 PTGS2P35354 604 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 KLF9Q13886 244 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 SLC51BQ86UW2 128 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 OR1N1Q8NGS0 311 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 BRIX1Q8TDN6 353 aaKnown RBP13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 HAVCR2Q8TDQ0 301 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 RELTQ969Z4 430 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 DNAJA3Q96EY1 480 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 AK6Q9Y3D8 172 aaKnown RBP13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 FRG2CA6NGY1 282 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 IDSB3KWA1 339 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 SC5DO75845 299 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 HEXBP07686 556 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 GUSBP08236 651 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 RRASP10301 218 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 SNTB2Q13425 540 aaKnown RBP13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 TP53I3Q53FA7 332 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 TCEAL6Q6IPX3 200 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 POMZP3Q6PJE2 187 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 BTN2A1Q7KYR7 527 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 SLC29A4Q7RTT9 530 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 CMIPQ8IY22 773 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 OR14A16Q8NHC5 309 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 NAT6Q93015 286 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 TCEAL3Q969E4 200 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 ZNF524Q96C55 264 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 ZNF426Q9BUY5 554 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 ZNF436Q9C0F3 470 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 WWTR1Q9GZV5 400 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 C20orf85Q9H1P6 137 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 ADGRL4Q9HBW9 690 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 SLC35A3Q9Y2D2 325 aa13.32□□□□□ -0.28
PPP4R3A-201ENST00000554308 EFCAB7A8K855 629 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 TRIM77I1YAP6 450 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 KHNYNO15037 678 aaKnown RBP13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 RGS11O94810 467 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 UBL3O95164 117 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 PPP1R3DO95685 299 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 ATF4P18848 351 aaPredicted RBP13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 MMP15P51511 669 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 FOXK2Q01167 660 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 IKZF1Q13422 519 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 YOD1Q5VVQ6 348 aaPredicted RBP13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 PPP1R3BQ86XI6 285 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 OR10A4Q9H209 315 aa13.31□□□□□ -0.28
PPP4R3A-201ENST00000554308 SCP2D1Q9UJQ7 156 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms