RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PAHP00439 452 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 IFNGP01579 166 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 C1QCP02747 245 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 TCRBP04435 133 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 GIPP09681 153 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 RRASP10301 218 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ACP5P13686 325 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ELK1P19419 428 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ZP3P21754 424 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 DNASE1P24855 282 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 LCN1P31025 176 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 FAUP35544 74 aaKnown RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 FEN1P39748 380 aaKnown RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 SSR2P43308 183 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 AVPR1BP47901 424 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 GBX2P52951 348 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 RGS8P57771 180 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 RAP2BP61225 183 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 HOXC5Q00444 222 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF155Q12901 538 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 POM121L1PQ3SYA9 428 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 TMEM52BQ4KMG9 183 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 Q5BKY6 102 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 UBE2NLQ5JXB2 153 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 IDNKQ5T6J7 187 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 OR2G6Q5TZ20 316 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 B3GNTL1Q67FW5 361 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 OR4C11Q6IEV9 310 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 NIPAL3Q6P499 406 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 SFXN4Q6P4A7 337 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 FAM122CQ6P4D5 195 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ZCCHC12Q6PEW1 402 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 CRIP3Q6Q6R5 217 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 PLEKHM3Q6ZWE6 761 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 MEPCEQ7L2J0 689 aaKnown RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 KRT74Q7RTS7 529 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 C16orf62Q7Z3J2 963 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 PXKQ7Z7A4 578 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ABI3BPQ7Z7G0 1075 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 AMZ2Q86W34 360 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 TRAPPC5Q8IUR0 188 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 LNX2Q8N448 690 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 OR6T1Q8NGN1 323 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 LHFPL5Q8TAF8 219 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 SPRYD4Q8WW59 207 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 XAGE5Q8WWM1 108 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 NSMAFQ92636 917 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 NAT6Q93015 286 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 SCAMP4Q969E2 229 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 TMEM203Q969S6 136 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ARRDC3Q96B67 414 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 OMA1Q96E52 524 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 MS4A4EQ96PG1 132 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 DMRTA2Q96SC8 542 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 CD180Q99467 661 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 NEU1Q99519 415 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ALG8Q9BVK2 526 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 TMED9Q9BVK6 235 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 HDHD5Q9BXW7 423 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 TEX101Q9BY14 249 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ACTRT3Q9BYD9 372 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 OR52A5Q9H2C5 316 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 MTHFD2LQ9H903 347 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 B3GAT2Q9NPZ5 323 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 IMP3Q9NV31 184 aaKnown RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 NUDT15Q9NV35 164 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 TAS2R8Q9NYW2 309 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 CD84Q9UIB8 345 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF222Q9UK12 451 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 SPATA2Q9UM82 520 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 ASF1AQ9Y294 204 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 CA5BQ9Y2D0 317 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 U3KQA8 63 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 LOC102723532A0A0G2JNH3 316 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SPTY2D1-AS1A0A0U1RR47 76 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 A0A0X1KG70 313 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 TRAPPC13A5PLN9 417 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 TMEM202A6NGA9 273 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 UNC119BA6NIH7 251 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 OR6C65A6NJZ3 312 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 A6NL46 340 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 HSPB2A8KAH6 182 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 B5MCH6 92 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 FAM227AF5H4B4 570 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 M0R3H8 397 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 KPNA3O00505 521 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SLC31A1O15431 190 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 FZD7O75084 574 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 DNAJB6O75190 326 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 MTX2O75431 263 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 POP7O75817 140 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 IL5P05113 134 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 DBIP07108 87 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 RAB40ALP0C0E4 278 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SLC35G4P0C7Q5 338 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 OR12D1P0DN82 309 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 LIPCP11150 499 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 MYF5P13349 255 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF3P17036 446 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 CTRB1P17538 263 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms