RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 IL17BQ9UHF5 180 aa8.74□□□□□ -1.01
SIX4-202ENST00000554079 ST6GALNAC2Q9UJ37 374 aa8.74□□□□□ -1.01
SIX4-202ENST00000554079 A0A0B4J2A0 478 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 CDRT15L2A8MXV6 281 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 HSPA12AO43301 675 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 KCNAB3O43448 404 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SLC2A10O95528 541 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 DIRAS3O95661 229 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 PLGP00747 810 aaPredicted RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 RPLP1P05386 114 aaKnown RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 QDPRP09417 244 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 CLUP10909 449 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 PGAM2P15259 253 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 CDKN1BP46527 198 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 PNLIPRP1P54315 467 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 EIF5AP63241 154 aaKnown RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 IRF8Q02556 426 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ARHGAP1Q07960 439 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ACSM2AQ08AH3 577 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 TUSC3Q13454 348 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SLC9A5Q14940 896 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 RAB35Q15286 201 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 CLEC12AQ5QGZ9 265 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ACSM2BQ68CK6 577 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SERPINA13PQ6UXR4 307 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 RPTNQ6XPR3 784 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 TMPPEQ6ZT21 453 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 UBE3DQ7Z6J8 389 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 GKN2Q86XP6 184 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SLC35F3Q8IY50 421 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 OR7G2Q8NG99 324 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 OR2A12Q8NGT7 310 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 OR9A4Q8NGU2 314 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SYNPRQ8TBG9 265 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 RNASE8Q8TDE3 154 aaKnown RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 CCDC107Q8WV48 283 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ASB17Q8WXJ9 295 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 HAVCR1Q96D42 359 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 CXorf40BQ96DE9 158 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 MUCL1Q96DR8 90 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 TMEM169Q96HH4 297 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 PTCHD1Q96NR3 888 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ADAM2Q99965 735 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 NDC1Q9BTX1 674 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SCRT1Q9BWW7 348 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 CIPCQ9C0C6 399 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ACTR3CQ9C0K3 210 aaPredicted RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 SLC25A31Q9H0C2 315 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 NCDNQ9UBB6 729 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SHPKQ9UHJ6 478 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ATG4BQ9Y4P1 393 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 WIF1Q9Y5W5 379 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 LTBP3Q9NS15 1303 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 TMEM269A0A1B0GVZ9 245 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 DAPL1A0PJW8 107 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 GXYLT2A0PJZ3 443 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ZC3H12DA2A288 527 aaKnown RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 SMCO3A2RU48 225 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 TMEM88BA6NKF7 163 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 CTNSO60931 367 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ALOX12BO75342 701 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 GLSO94925 669 aaPredicted RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 OR2C1O95371 312 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ANXA5P08758 320 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ANXA4P09525 319 aaPredicted RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 RAB40ALP0C0E4 278 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 HLA-GP17693 338 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 DGKAP23743 735 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 AOAHP28039 575 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 GJA4P35212 333 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 THBS4P35443 961 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SLC6A12P48065 614 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 PPM1FP49593 454 aaPredicted RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 SKP1P63208 163 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 DUSP5Q16690 384 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 PGGHGQ32M88 737 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ETFRF1Q6IPR1 90 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 LCTLQ6UWM7 567 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ZNF280BQ86YH2 543 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 FOXRED2Q8IWF2 684 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ZNF784Q8NCA9 323 aaPredicted RBP8.73□□□□□ -1.01
SIX4-202ENST00000554079 OR1J2Q8NGS2 313 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 RAB40AQ8WXH6 277 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 GHSRQ92847 366 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 TMEM19Q96HH6 336 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SEC22AQ96IW7 307 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 ADGRG7Q96K78 797 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 FNDC11Q9BVV2 318 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 A4GALTQ9NPC4 353 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 MARCH5Q9NX47 278 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 SAGE1Q9NXZ1 904 aa8.73□□□□□ -1.01
SIX4-202ENST00000554079 TRBV6-7A0A0A0MS04 114 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 IFITM5A6NNB3 132 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 M0QZK8 103 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 M0R3H8 397 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 NFKBIEO00221 500 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 DCTN6O00399 190 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 AGPAT2O15120 278 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms