RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 A0A096LPE4 126 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 A0A1W2PPZ6 126 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 MS4A18H0YCH9 400 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 MFN2O95140 757 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 MT-ATP6P00846 226 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 BGLAPP02818 100 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 OR4A8P0C604 315 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 IGHV4-31P0DP07 118 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 COX4I1P13073 169 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 NPR2P20594 1047 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 GIFP27352 417 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 CALCRP30988 508 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 NR4A2P43354 598 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 IDH3GP51553 393 aaPredicted RBP5.73□□□□□ -1.49
SLIRP-203ENST00000554074 RGS8P57771 180 aaPredicted RBP5.73□□□□□ -1.49
SLIRP-203ENST00000554074 ARF1P84077 181 aaKnown RBP5.73□□□□□ -1.49
SLIRP-203ENST00000554074 HGFACQ04756 655 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 PUDPQ08623 228 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 NFYCQ13952 458 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 OR1Q1Q15612 314 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 CEACAM16Q2WEN9 425 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 MS4A18Q3C1V0 323 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 GLIPR1L2Q4G1C9 344 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 RUNDC3AQ59EK9 446 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF613Q6PF04 617 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 LINC00114Q6XXX2 140 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 SLC46A3Q7Z3Q1 461 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 PXKQ7Z7A4 578 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 DHDDSQ86SQ9 333 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 ARMC8Q8IUR7 673 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 KDM8Q8N371 416 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 C11orf65Q8NCR3 313 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 NEU4Q8WWR8 484 aaPredicted RBP5.73□□□□□ -1.49
SLIRP-203ENST00000554074 HTRA1Q92743 480 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 CGREF1Q99674 301 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 DOK1Q99704 481 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 ARHGDIGQ99819 225 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 REPIN1Q9BWE0 567 aaKnown RBP5.73□□□□□ -1.49
SLIRP-203ENST00000554074 ASPNQ9BXN1 380 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 RAB1BQ9H0U4 201 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 IKZF5Q9H5V7 419 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 B3GAT2Q9NPZ5 323 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 B3GNT2Q9NY97 397 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 SEC14L4Q9UDX3 406 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.73□□□□□ -1.49
SLIRP-203ENST00000554074 FBXL3Q9UKT7 428 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 TANC2Q9HCD6 1990 aa5.73□□□□□ -1.49
SLIRP-203ENST00000554074 DOCK11Q5JSL3 2073 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 IGHV2OR16-5A0A0B4J2B6 119 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 PLPP3O14495 311 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 MRASO14807 208 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 CHP2O43745 196 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 LMX1BO60663 402 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 TPST2O60704 377 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 ENTPD5O75356 428 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 LY6HO94772 140 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 HPRP00739 348 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 ERCC1P07992 297 aaPredicted RBP5.72□□□□□ -1.49
SLIRP-203ENST00000554074 CELA3BP08861 270 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 HLA-DOBP13765 273 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 NQO1P15559 274 aaKnown RBP5.72□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF23P17027 643 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 THBS4P35443 961 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 EVX1P49640 407 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 CDH12P55289 794 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 TUBA1BP68363 451 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 TUBA4AP68366 448 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 ZP4Q12836 540 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 PMS2P3Q13401 168 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 GSG1Q2KHT4 349 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 PHYHD1Q5SRE7 291 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 REP15Q6BDI9 236 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 FAM166AQ6J272 317 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 ERICH5Q6P6B1 374 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 TUBA1AQ71U36 451 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 MDP1Q86V88 176 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 MYPOPQ86VE0 399 aaPredicted RBP5.72□□□□□ -1.49
SLIRP-203ENST00000554074 PTOV1Q86YD1 416 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 ARHGAP24Q8N264 748 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 OR5J2Q8NH18 312 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 RASSF5Q8WWW0 418 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 TMEM158Q8WZ71 300 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 HPS1Q92902 700 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 POP5Q969H6 163 aaKnown RBP5.72□□□□□ -1.49
SLIRP-203ENST00000554074 LRRC58Q96CX6 371 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF837Q96EG3 531 aaPredicted RBP5.72□□□□□ -1.49
SLIRP-203ENST00000554074 MPP4Q96JB8 637 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF75AQ96N20 296 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 FOXN4Q96NZ1 517 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 MOGAT1Q96PD6 335 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 KCNK17Q96T54 332 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 VRK1Q99986 396 aaPredicted RBP5.72□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF426Q9BUY5 554 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 PRR14Q9BWN1 585 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 SLC19A3Q9BZV2 496 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 SHARPINQ9H0F6 387 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 PCDHAC1Q9H158 963 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 SEC61A2Q9H9S3 476 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 NOX3Q9HBY0 568 aa5.72□□□□□ -1.49
SLIRP-203ENST00000554074 TAGLN3Q9UI15 199 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms