RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 TMEFF2Q9UIK5 374 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF346Q9UL40 294 aaKnown RBP10.84□□□□□ -0.67
SHMT2-209ENST00000553949 POFUT2Q9Y2G5 429 aa10.84□□□□□ -0.67
SHMT2-209ENST00000553949 ADAM18Q9Y3Q7 739 aa10.84□□□□□ -0.67
SHMT2-209ENST00000553949 WIPF3A6NGB9 483 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 FAM90A27PA6NNH2 459 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 EEF1E1-BLOC1S5C9J1V9 151 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 H3BN98 237 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 SOCS2O14508 198 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 MSTNO14793 375 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 EEF1E1O43324 174 aaKnown RBP10.83□□□□□ -0.68
SHMT2-209ENST00000553949 MITFO75030 526 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-209ENST00000553949 PPP1R3DO95685 299 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 ALPLP05186 524 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 APEHP13798 732 aaKnown RBP10.83□□□□□ -0.68
SHMT2-209ENST00000553949 ALDH3A2P51648 485 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 RPS6KA3P51812 740 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 RPL27P61353 136 aaKnown RBP10.83□□□□□ -0.68
SHMT2-209ENST00000553949 RUNX1T1Q06455 604 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 SLC34A1Q06495 639 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 RIPK1Q13546 671 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 CDSNQ15517 529 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 SLC25A35Q3KQZ1 300 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 CARD17Q5XLA6 110 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 LPCAT4Q643R3 524 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 ZBTB49Q6ZSB9 765 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 FAM122BQ7Z309 247 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 HDDC2Q7Z4H3 204 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 TMEM123Q8N131 208 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 FAM26EQ8N5C1 309 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 ZNF610Q8N9Z0 462 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 TEX47Q8TBZ9 253 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 MAGEE2Q8TD90 523 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-209ENST00000553949 SLC25A44Q96H78 314 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-209ENST00000553949 SLC29A1Q99808 456 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 TSSK6Q9BXA6 273 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 SLCO5A1Q9H2Y9 848 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 JKAMPQ9P055 326 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 GRHPRQ9UBQ7 328 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 PRSS50Q9UI38 385 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 IER3IP1Q9Y5U9 82 aa10.83□□□□□ -0.68
SHMT2-209ENST00000553949 UBR5O95071 2799 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-209ENST00000553949 PHF3Q92576 2039 aaKnown RBP10.82□□□□□ -0.68
SHMT2-209ENST00000553949 TEX13CA0A0J9YWL9 993 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 CLEC18AA5D8T8 446 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 A6NIZ1 184 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 A8MXE2 369 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 BHLHE40O14503 412 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 IMPA2O14732 288 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 CASQ2O14958 399 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ARPC3O15145 178 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 SLC43A1O75387 559 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 UPK3AO75631 287 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ATP6V1G2O95670 118 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 TXNDC12O95881 172 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 IGHV3-9P01782 118 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 IGHG1P01857 330 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 RNF224P0DH78 156 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ACADSP16219 412 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 POU1F1P28069 291 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 PEX2P28328 305 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 SDHAP31040 664 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ACVR1BP36896 505 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 RAP1BP61224 184 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ESRRGP62508 458 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 RAP1AP62834 184 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 LGALS3BPQ08380 585 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 CAMK2DQ13557 499 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 LRRC36Q1X8D7 754 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 TSPO2Q5TGU0 170 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 FBXW9Q5XUX1 488 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 FAM205BPQ63HN1 556 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 GPR139Q6DWJ6 353 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ZNF474Q6S9Z5 364 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-209ENST00000553949 CLEC18BQ6UXF7 455 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 LUZP2Q86TE4 346 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 C20orf196Q8IYI0 205 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 UBE2J2Q8N2K1 259 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ARIH2OSQ8N7S6 290 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 CLEC18CQ8NCF0 446 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 OR2T33Q8NG76 320 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 OR4Q3Q8NH05 313 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ZNF519Q8TB69 540 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ZNF566Q969W8 418 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 RASD2Q96D21 266 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 Q96M85 177 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ZNF570Q96NI8 536 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ERMAPQ96PL5 475 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ENOPH1Q9UHY7 261 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 BAIAP2Q9UQB8 552 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 DOCK7Q96N67 2140 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 HIVEP3Q5T1R4 2406 aa10.82□□□□□ -0.68
SHMT2-209ENST00000553949 ARHGAP21Q5T5U3 1957 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 MYO7BQ6PIF6 2116 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 MED12LQ86YW9 2145 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 NKX2-6A6NCS4 301 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 OR6C65A6NJZ3 312 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 CENPBD1B2RD01 187 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 M0R3G1 203 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 XKRYO14609 159 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms