RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 TXNDC12O95881 172 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 SFTPDP35247 375 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 SSR4P51571 173 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 ACSM1Q08AH1 577 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 MS4A18Q3C1V0 323 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 STK35Q8TDR2 534 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 PELI1Q96FA3 418 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 DACH2Q96NX9 599 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 UQCC2Q9BRT2 126 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 TSPAN10Q9H1Z9 355 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 HMG20AQ9NP66 347 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 RIF1Q5UIP0 2472 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 A0A1W2PRG6 482 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 MT-ATP6P00846 226 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 GNALP38405 381 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 LGALS3BPQ08380 585 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 CD200R1LQ6Q8B3 271 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 GDPGP1Q6ZNW5 385 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 DEFB124Q8NES8 71 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 OR4K17Q8NGC6 315 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 KCTD7Q96MP8 289 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 DDA1Q9BW61 102 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 TRIM36Q9NQ86 728 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 MED29Q9NX70 200 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 P4HTMQ9NXG6 502 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 NCDNQ9UBB6 729 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 NOSIPQ9Y314 301 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 A0A1W2PPK0 400 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 HTR3EA5X5Y0 456 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 OR6A2O95222 327 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 APEHP13798 732 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 SOX6P35712 828 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 DLSTP36957 453 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 APOBEC1P41238 236 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 HTR3AP46098 478 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 SUMO3P55854 103 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 MLF1P58340 268 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 MYBPHQ13203 477 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 SNTA1Q13424 505 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 ATP1A4Q13733 1029 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 TRIP6Q15654 476 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 LCN1P1Q5VSP4 162 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 BTN2A1Q7KYR7 527 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 SNX33Q8WV41 574 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 TXNDC15Q96J42 360 aa11.46□□□□□ -0.57
VIPAS39-206ENST00000553888 CCDC187A0A096LP49 1063 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 SPAARA0A1B0GVQ0 90 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 TRDV1A0A1B0GX56 115 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 ZNF814B7Z6K7 855 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 RGS5O15539 181 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 TNFSF15O95150 251 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 OR2T7P0C7T2 308 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 RPL27P61353 136 aaKnown RBP11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 FMODQ06828 376 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 POU4F2Q12837 409 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 MEP1BQ16820 701 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 LRRC69Q6ZNQ3 347 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 LAX1Q8IWV1 398 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 POMGNT2Q8NAT1 580 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 OR2T27Q8NH04 317 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 ZNF519Q8TB69 540 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 HSD17B8Q92506 261 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 SMURF1Q9HCE7 757 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 POLE4Q9NR33 117 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 INPP5EQ9NRR6 644 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 PLEKHB1Q9UF11 243 aaPredicted RBP11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 ST6GALNAC2Q9UJ37 374 aa11.46□□□□□ -0.58
VIPAS39-206ENST00000553888 ZNF292O60281 2723 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 LAMA5O15230 3695 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 A0A1B0GTH9 108 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 LOC101059948A0A1B0GTJ6 334 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 TP53I11O14683 189 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 IFNGR1P15260 489 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 MAGEB1P43366 347 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 DNASE1L1P49184 302 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 ACTC1P68032 377 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 ACTA1P68133 377 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 OPN5Q6U736 354 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 NR2C2APQ86WQ0 139 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 ZBTB8BQ8NAP8 495 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 FAM83FQ8NEG4 500 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 OR6N2Q8NGY6 317 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 SLC25A46Q96AG3 418 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 PGLYRP3Q96LB9 341 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 C5orf34Q96MH7 638 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 RBM14Q96PK6 669 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 AMELYQ99218 206 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 PDCD1LG2Q9BQ51 273 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 EMC6Q9BV81 110 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 HPF1Q9NWY4 346 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 IL17BQ9UHF5 180 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 ZFHX2Q9C0A1 2572 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 IGLV3-32A0A0A0MS00 114 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 XKRYO14609 159 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 SLC16A7O60669 478 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 RAMP1O60894 148 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 RPP14O95059 124 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 MPZL1O95297 269 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 RENP00797 406 aa11.45□□□□□ -0.58
VIPAS39-206ENST00000553888 OR8G3PP0DMU2 310 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms