RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 NPHS2Q9NP85 383 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 SLC6A13Q9NSD5 602 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 B3GAT1Q9P2W7 334 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 EGFL7Q9UHF1 273 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 POFUT2Q9Y2G5 429 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 AZIN1O14977 448 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 NPIPB7O75200 414 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 LYPLA1O75608 230 aaPredicted RBP11.63□□□□□ -0.55
PRPF39-204ENST00000553605 UBL3O95164 117 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 OR8G3PP0DMU2 310 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 MYL2P10916 166 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 B4GALT1P15291 398 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 DRD4P21917 467 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 MAPK1P28482 360 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 ZNF81P51508 661 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 ERVS71-1P61550 626 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 GNG11P61952 73 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 HPCAP84074 193 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 RBBP4Q09028 425 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 MFSD13AQ14CX5 517 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 CARD17Q5XLA6 110 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 TNFAIP8L2Q6P589 184 aaPredicted RBP11.63□□□□□ -0.55
PRPF39-204ENST00000553605 ZYG11AQ6WRX3 759 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 RNF130Q86XS8 419 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 C20orf196Q8IYI0 205 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 KLHL36Q8N4N3 616 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 KRTCAP2Q8N6L1 136 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 MFSD8Q8NHS3 518 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 UPRTQ96BW1 309 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 DUSP26Q9BV47 211 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 ZDHHC18Q9NUE0 388 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 NPTNQ9Y639 398 aa11.63□□□□□ -0.55
PRPF39-204ENST00000553605 TRAV40A0A0B4J280 105 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 PRAMEF27A3QJZ7 478 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 A8MXK9 166 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 FTCDNL1E5RQL4 147 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 SPRY3O43610 288 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 AKAP8O43823 692 aaKnown RBP11.62□□□□□ -0.55
PRPF39-204ENST00000553605 AHSA1O95433 338 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 CHEK2O96017 543 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 IGHV1-46P01743 117 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 IGHV2-70P01814 119 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 PATE4P0C8F1 98 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 MYZAPP0CAP1 466 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 GTF2E2P29084 291 aaKnown RBP11.62□□□□□ -0.55
PRPF39-204ENST00000553605 GLO1Q04760 184 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 GNA13Q14344 377 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 CHI3L2Q15782 390 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 WBP2NLQ6ICG8 309 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 Q6YL49 198 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 ZNF620Q6ZNG0 422 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 CLECL1Q8IZS7 167 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 CADM2Q8N3J6 435 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 PAQR4Q8N4S7 273 aaPredicted RBP11.62□□□□□ -0.55
PRPF39-204ENST00000553605 SPICQ8N5J4 248 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 CPEB3Q8NE35 698 aaKnown RBP11.62□□□□□ -0.55
PRPF39-204ENST00000553605 OR10S1Q8NGN2 331 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 DCLRE1CQ96SD1 692 aaKnown RBP11.62□□□□□ -0.55
PRPF39-204ENST00000553605 DPY30Q9C005 99 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 NOX4Q9NPH5 578 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 OR5V1Q9UGF6 321 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 PRDM4Q9UKN5 801 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 DNAJC15Q9Y5T4 150 aa11.62□□□□□ -0.55
PRPF39-204ENST00000553605 TENM3Q9P273 2699 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 A0A096LPI6 279 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 ZNF500O60304 480 aaPredicted RBP11.61□□□□□ -0.55
PRPF39-204ENST00000553605 IGHV3-13P01766 116 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 GKN3PP0CG01 181 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 CCL2P13500 99 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 IL7RP16871 459 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 PRPS1L1P21108 318 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 RPS5P46782 204 aaKnown RBP11.61□□□□□ -0.55
PRPF39-204ENST00000553605 UCP2P55851 309 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 DNAJB13P59910 316 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 RPL15P61313 204 aaKnown RBP11.61□□□□□ -0.55
PRPF39-204ENST00000553605 COPZ1P61923 177 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 PGS1Q32NB8 556 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 MRPL2Q5T653 305 aaKnown RBP11.61□□□□□ -0.55
PRPF39-204ENST00000553605 RUSC1-AS1Q66K80 236 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 BRD3OSQ6XYD6 125 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 ZCCHC23Q6ZST2 131 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 RIMKLAQ8IXN7 391 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 DDIASQ8IXT1 998 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 ZNF440Q8IYI8 595 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 TMEM86BQ8N661 226 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 ICA1LQ8NDH6 482 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 SLC30A7Q8NEW0 376 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 STK35Q8TDR2 534 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 LRR1Q96L50 414 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 FOXB1Q99853 325 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 EGLN1Q9GZT9 426 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 CDH20Q9HBT6 801 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 B3GAT2Q9NPZ5 323 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 RLIMQ9NVW2 624 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 GIMAP2Q9UG22 337 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 IL20RAQ9UHF4 553 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 EMCNQ9ULC0 261 aa11.61□□□□□ -0.55
PRPF39-204ENST00000553605 TM9SF1O15321 606 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 PIP5K1CO60331 668 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 PEX11AO75192 247 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms