RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 UMPSP11172 480 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 COX4I1P13073 169 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 MYBPC1Q00872 1141 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 ADIPOQQ15848 244 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 SWI5Q1ZZU3 235 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 COQ5Q5HYK3 327 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 SWT1Q5T5J6 900 aaKnown RBP15.8■□□□□ 0.12
SHMT2-206ENST00000553529 SLC35D2Q76EJ3 337 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 SLC15A3Q8IY34 581 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 MICU2Q8IYU8 434 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 MAGEE2Q8TD90 523 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-206ENST00000553529 ZNF75AQ96N20 296 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 ULBP2Q9BZM5 246 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 FKRPQ9H9S5 495 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 CA10Q9NS85 328 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 ARFGEF3Q5TH69 2177 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 IGHV2OR16-5A0A0B4J2B6 119 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 BBIP1A8MTZ0 92 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 KIAA1324LA8MWY0 1029 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-206ENST00000553529 RNF13O43567 381 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 TMCC2O75069 709 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 IGFBP1P08833 259 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-206ENST00000553529 CD79AP11912 226 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 NCK1P16333 377 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 APOBEC3AP31941 199 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-206ENST00000553529 THBS4P35443 961 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 TAS2R41P59536 307 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 INTS11Q5TA45 600 aaKnown RBP15.79■□□□□ 0.12
SHMT2-206ENST00000553529 KRT80Q6KB66 452 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 ZNF544Q6NX49 715 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 ZNF813Q6ZN06 617 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 PXKQ7Z7A4 578 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 SLC30A8Q8IWU4 369 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 DEPDC4Q8N2C3 294 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 OR2T12Q8NG77 320 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 OR6N1Q8NGY5 312 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 PROX1Q92786 737 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 TMEM54Q969K7 222 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 GRIP2Q9C0E4 1043 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 FAM107BQ9H098 131 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 NANSQ9NR45 359 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 B3GNT2Q9NY97 397 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 RIMS3Q9UJD0 308 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 NOX1Q9Y5S8 564 aa15.79■□□□□ 0.12
SHMT2-206ENST00000553529 BLOC1S5-TXNDC5H3BN57 136 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 MT-ATP6P00846 226 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 OR4A8P0C604 315 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 CBR1P16152 277 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 KDELR2P33947 212 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 AQP2P41181 271 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 CSNK1A1P48729 337 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 SLC7A2P52569 658 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 LIPEQ05469 1076 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 RPL18Q07020 188 aaKnown RBP15.78■□□□□ 0.12
SHMT2-206ENST00000553529 LRFN4Q6PJG9 635 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 SSX8Q7RTT4 187 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 CLDN22Q8N7P3 220 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 ZNF347Q96SE7 839 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 ELAC2Q9BQ52 826 aaKnown RBP15.78■□□□□ 0.12
SHMT2-206ENST00000553529 KATNB1Q9BVA0 655 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 OBP2BQ9NPH6 170 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 A4GNTQ9UNA3 340 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 NIPBLQ6KC79 2804 aaeCLIP15.78■□□□□ 0.12
SHMT2-206ENST00000553529 CSPG4Q6UVK1 2322 aa15.78■□□□□ 0.12
SHMT2-206ENST00000553529 NSD1Q96L73 2696 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-206ENST00000553529 ABCA2Q9BZC7 2435 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 IGKV1D-43A0A0B4J1Z2 117 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 OR6C65A6NJZ3 312 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 ZNF726A6NNF4 738 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 H7C417 338 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 FFAR1O14842 300 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 GIPRP48546 466 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 PTDSS1P48651 473 aaKnown RBP15.77■□□□□ 0.12
SHMT2-206ENST00000553529 SH3BGRP55822 239 aaPredicted RBP15.77■□□□□ 0.12
SHMT2-206ENST00000553529 RAB35Q15286 201 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 MAPRE2Q15555 327 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 HSP90B2PQ58FF3 399 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 C8orf82Q6P1X6 216 aaPredicted RBP15.77■□□□□ 0.12
SHMT2-206ENST00000553529 TSEN54Q7Z6J9 526 aaKnown RBP15.77■□□□□ 0.12
SHMT2-206ENST00000553529 IGFN1Q86VF2 1251 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 ZNF584Q8IVC4 421 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 SKA3Q8IX90 412 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 CDK20Q8IZL9 346 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 SVOPLQ8N434 492 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 OR10H5Q8NGA6 315 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 ADAD1Q96M93 576 aaKnown RBP15.77■□□□□ 0.12
SHMT2-206ENST00000553529 FOXB1Q99853 325 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 SH3GL3Q99963 347 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 MAN2C1Q9NTJ4 1040 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 ZNF229Q9UJW7 825 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 FZR1Q9UM11 496 aa15.77■□□□□ 0.12
SHMT2-206ENST00000553529 NAV3Q8IVL0 2385 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 TMEM129A0AVI4 362 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 ELOVL7A1L3X0 281 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 SH3PXD2BA1X283 911 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 AKAP8O43823 692 aaKnown RBP15.76■□□□□ 0.11
SHMT2-206ENST00000553529 OR7A10O76100 309 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 OR6A2O95222 327 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 CRYAAP02489 173 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 MT-ND1P03886 318 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms