RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 NDUFB5O43674 189 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 DUX1O43812 170 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 TSPAN2O60636 221 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 PRAF2O60831 178 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 UPK3AO75631 287 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ABHD16AO95870 558 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 DHPSP49366 369 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ZNF117Q03924 483 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 KLF9Q13886 244 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 SGCBQ16585 318 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 LIPNQ5VXI9 398 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 FDX2Q6P4F2 183 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 FAM199XQ6PEV8 388 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ZNF767PQ75MW2 155 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 BTN2A1Q7KYR7 527 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 SLC29A4Q7RTT9 530 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 MISPQ8IVT2 679 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 METTL27Q8N6F8 245 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 GATSQ8NAP1 163 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ASB17Q8WXJ9 295 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 MAP6Q96JE9 813 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 GFM1Q96RP9 751 aaKnown RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 LMF1Q96S06 567 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ADOQ96SZ5 270 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 BEX2Q9BXY8 128 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 TTTY10Q9BZA0 68 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ZNF304Q9HCX3 659 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 FKBP7Q9Y680 259 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 MAU2Q9Y6X3 613 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 DNAH14Q0VDD8 3507 aa11.71□□□□□ -0.53
SHMT2-205ENST00000553474 A0A1B0GVI7 797 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 TRABD2BA6NFA1 517 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 XKRYO14609 159 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 PIN1P1O15428 100 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 MAGEB4O15481 346 aaPredicted RBP11.71□□□□□ -0.54
SHMT2-205ENST00000553474 OIP5O43482 229 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 HCRTR2O43614 444 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 ICOSLGO75144 302 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF254O75437 659 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 SLC25A12O75746 678 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 BGLAPP02818 100 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 ALOX5APP20292 161 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 FBLP22087 321 aaKnown RBP11.71□□□□□ -0.54
SHMT2-205ENST00000553474 MAOBP27338 520 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 DPP4P27487 766 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 PSMB10P40306 273 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 NANOS3P60323 173 aaKnown RBP11.71□□□□□ -0.54
SHMT2-205ENST00000553474 DGCR2P98153 550 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 LTBQ06643 244 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 DBPQ10586 325 aaPredicted RBP11.71□□□□□ -0.54
SHMT2-205ENST00000553474 CBFBQ13951 182 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 LPAL2Q16609 132 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 DEFB133Q30KQ1 61 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF528Q3MIS6 628 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 MESTQ5EB52 335 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 ELFN2Q5R3F8 820 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 BCL2L15Q5TBC7 163 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF782Q6ZMW2 699 aaPredicted RBP11.71□□□□□ -0.54
SHMT2-205ENST00000553474 PRSS42Q7Z5A4 293 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 SIAH3Q8IW03 269 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 OR4D9Q8NGE8 314 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 OR1N1Q8NGS0 311 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 OR6S1Q8NH40 331 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.54
SHMT2-205ENST00000553474 KTI12Q96EK9 354 aaPredicted RBP11.71□□□□□ -0.54
SHMT2-205ENST00000553474 ZFP3Q96NJ6 502 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 TSPAN32Q96QS1 320 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 TBL1XR1Q9BZK7 514 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 GALNT9Q9HCQ5 603 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 KLHL9Q9P2J3 617 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 MRM2Q9UI43 246 aaKnown RBP11.71□□□□□ -0.54
SHMT2-205ENST00000553474 R4GN57 208 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 CACNA1HO95180 2353 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 SEC16AO15027 2179 aa11.71□□□□□ -0.54
SHMT2-205ENST00000553474 RP1P56715 2156 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 IGHV1OR21-1A0A087WYE8 117 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 A0A1B0GX78 115 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 A0A1W2PPK0 400 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 TMEM72A0PK05 275 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 TTLL8A6PVC2 850 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 PIAS2O75928 621 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 SNAPC5O75971 98 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 CD3GP09693 182 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 ANXA3P12429 323 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 GP1BBP13224 206 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 PRKCAP17252 672 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 CCR9P51686 369 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 POLR2HP52434 150 aaKnown RBP11.7□□□□□ -0.54
SHMT2-205ENST00000553474 GXYLT1Q4G148 440 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 STAC2Q6ZMT1 411 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 CMTM4Q8IZR5 234 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 OR6V1Q8N148 313 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF511Q8NB15 262 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 HSD17B8Q92506 261 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 TAAR8Q969N4 342 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 MIB2Q96AX9 1013 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 HAVCR1Q96D42 359 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 SLC41A2Q96JW4 573 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 INTS14Q96SY0 518 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 WWTR1Q9GZV5 400 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms