RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 C1QTNF5Q9BXJ0 243 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ULBP2Q9BZM5 246 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 DDX28Q9NUL7 540 aaKnown RBP7.75□□□□□ -1.17
SYNE2-209ENST00000553308 AIG1Q9NVV5 245 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 MED29Q9NX70 200 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 CALML5Q9NZT1 146 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 TAAR3PQ9P1P4 343 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 SLC7A8Q9UHI5 535 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 OPN4Q9UHM6 478 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 LGALS13Q9UHV8 139 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 PRDM4Q9UKN5 801 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF346Q9UL40 294 aaKnown RBP7.75□□□□□ -1.17
SYNE2-209ENST00000553308 POFUT2Q9Y2G5 429 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 CACNG2Q9Y698 323 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 LOC102725191A0A1B0GVB3 256 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 C17orf100A8MU93 164 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 MS4A18H0YCH9 400 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 J3QLI3 93 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 RFXANKO14593 260 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 OR2T1O43869 369 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 TYROBPO43914 113 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF500O60304 480 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-209ENST00000553308 SERPINE1P05121 402 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 FAM157BP0CG42 384 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 NQO1P15559 274 aaKnown RBP7.74□□□□□ -1.17
SYNE2-209ENST00000553308 HTR2AP28223 471 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 CRATP43155 626 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 RPL14P50914 215 aaKnown RBP7.74□□□□□ -1.17
SYNE2-209ENST00000553308 DSTNP60981 165 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 FOXL1Q12952 345 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 CAMK2DQ13557 499 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 MS4A18Q3C1V0 323 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 RGS7BPQ6MZT1 257 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-209ENST00000553308 OGFOD2Q6N063 350 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 TREML4Q6UXN2 200 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 COMTD1Q86VU5 262 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 PAQR4Q8N4S7 273 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-209ENST00000553308 SIGLECL1Q8N7X8 197 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 EIF1ADQ8N9N8 165 aaKnown RBP7.74□□□□□ -1.17
SYNE2-209ENST00000553308 ADPRHL1Q8NDY3 354 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 FGFBP3Q8TAT2 258 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 DVL3Q92997 716 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-209ENST00000553308 SLC38A4Q969I6 547 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 RSPO3Q9BXY4 272 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-209ENST00000553308 OR51B6Q9H340 312 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 C7orf69Q9H7B7 122 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 MEAF6Q9HAF1 191 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 B3GAT2Q9NPZ5 323 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 HINT3Q9NQE9 182 aaKnown RBP7.74□□□□□ -1.17
SYNE2-209ENST00000553308 KLHL14Q9P2G3 628 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 RPS6KB2Q9UBS0 482 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 RAP2CQ9Y3L5 183 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 WIPI2Q9Y4P8 454 aa7.74□□□□□ -1.17
SYNE2-209ENST00000553308 IGLV3-9A0A075B6K5 115 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 TRAV36DV7A0A075B6V5 113 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 A0A087WUJ7 227 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 IGHV1-69-2A0A0G2JMI3 117 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 A0A0G2JPF8 293 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 A0A1B0GWA3 101 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 DNAJC9-AS1A6NH13 148 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 HNRNPCL2B2RXH8 293 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 HNRNPCL3B7ZW38 293 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 CLDN25C9JDP6 229 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 HNRNPCL1O60812 293 aaKnown RBP7.73□□□□□ -1.17
SYNE2-209ENST00000553308 SERPINI2O75830 405 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 UBL3O95164 117 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 BGLAPP02818 100 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 SERPINA5P05154 406 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 NUDT7P0C024 238 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 HNRNPCL4P0DMR1 293 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 CCL2P13500 99 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 LSP1P33241 339 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 CRYBB2P43320 205 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 RAD52P43351 418 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 KLF3P57682 345 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-209ENST00000553308 LCN2P80188 198 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 GLO1Q04760 184 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 MIDNQ504T8 468 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 TMEM154Q6P9G4 183 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 C5orf46Q6UWT4 87 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 NHLRC1Q6VVB1 395 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 USP51Q70EK9 711 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 SKA3Q8IX90 412 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 MIER2Q8N344 545 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 OR6N1Q8NGY5 312 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 SNX33Q8WV41 574 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 VPS33AQ96AX1 596 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 SLC41A3Q96GZ6 507 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 LRR1Q96L50 414 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 C1orf147Q96MC9 270 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-209ENST00000553308 MOGAT1Q96PD6 335 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 DENND2DQ9H6A0 471 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-209ENST00000553308 ARMC7Q9H6L4 198 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 UNKLQ9H9P5 680 aaKnown RBP7.73□□□□□ -1.17
SYNE2-209ENST00000553308 TPT1P8Q9HAU6 139 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 C12orf10Q9HB07 376 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 NTN4Q9HB63 628 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 CACYBPQ9HB71 228 aaKnown RBP7.73□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF232Q9UNY5 417 aa7.73□□□□□ -1.17
SYNE2-209ENST00000553308 IFT52Q9Y366 437 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms