RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CDK20Q8IZL9 346 aa10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 GPR137CQ8N3F9 429 aa10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 OR4K5Q8NGD3 323 aa10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 OR6X1Q8NH79 312 aa10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 LURAP1Q96LR2 239 aa10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 SEPHS2Q99611 448 aa10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 CADM1Q9BY67 442 aaKnown RBP10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 POLDIP3Q9BY77 421 aaKnown RBP10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 CLEC4MQ9H2X3 399 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 B3GAT2Q9NPZ5 323 aa10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 INIPQ9NRY2 104 aa10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 STX18Q9P2W9 335 aaKnown RBP10.3□□□□□ -0.76
TRAFD1-209ENST00000552896 TRAV27A0A087WT01 109 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 DHRS12A0PJE2 317 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 SH3PXD2BA1X283 911 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 CENPBD1B2RD01 187 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 GSC2O15499 205 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 CLOCKO15516 846 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 UPK3AO75631 287 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 KRT36O76013 467 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 RAP2AP10114 183 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 HOXC12P31275 282 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 RRM2P31350 389 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 AQP2P41181 271 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 FOXG1P55316 489 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 PRPS1P60891 318 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 ROR2Q01974 943 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 FHL1Q13642 323 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 PPA1Q15181 289 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 SEC23BQ15437 767 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 TAF11Q15544 211 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 STK11Q15831 433 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 ALG10Q5BKT4 473 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 C9orf135Q5VTT2 229 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 FBXW10Q5XX13 1052 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 HMBOX1Q6NT76 420 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 TBPL2Q6SJ96 375 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 OAFQ86UD1 273 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 WFDC8Q8IUA0 241 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 NOXO1Q8NFA2 376 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 OR1K1Q8NGR3 316 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 OR13C2Q8NGS9 318 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 OR52J3Q8NH60 311 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 MOSPD2Q8NHP6 518 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 ASB10Q8WXI3 467 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 MUCL1Q96DR8 90 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 FAM46AQ96IP4 442 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 TXNDC15Q96J42 360 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 MUS81Q96NY9 551 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 KCNK17Q96T54 332 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 EMC6Q9BV81 110 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 NDEL1Q9GZM8 345 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 MMADHCQ9H3L0 296 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 GPR35Q9HC97 309 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 NGBQ9NPG2 151 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 SLC7A8Q9UHI5 535 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 POMPQ9Y244 141 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 AMDHD2Q9Y303 409 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 LYVE1Q9Y5Y7 322 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 CSMD1Q96PZ7 3565 aa10.29□□□□□ -0.76
TRAFD1-209ENST00000552896 CCDC168Q8NDH2 2452 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 MYO9AB2RTY4 2548 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 ZNF726A6NNF4 738 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 ZNF99A8MXY4 864 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 MCIDASD6RGH6 385 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 CDC42EP2O14613 210 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 KLF4O43474 513 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 BCL10O95999 233 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 IGHG1P01857 330 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 F13BP05160 661 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 PGA4P0DJD7 388 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 PGA3P0DJD8 388 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 LOXP28300 417 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 OMPP47874 163 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 CSNK1A1P48729 337 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 KRTAP10-9P60411 292 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 CAMK2DQ13557 499 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 GK3PQ14409 553 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 MELKQ14680 651 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 CARD17Q5XLA6 110 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 FAM205BPQ63HN1 556 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 KLHL24Q6TFL4 600 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 MEX3DQ86XN8 651 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 CDC20BQ86Y33 519 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 WDFY1Q8IWB7 410 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 ADGRG5Q8IZF4 528 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 OR6N1Q8NGY5 312 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 MAGEE2Q8TD90 523 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 TMEM54Q969K7 222 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 ZNF566Q969W8 418 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 PIK3IP1Q96FE7 263 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 SLC25A44Q96H78 314 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 RSRC1Q96IZ7 334 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 ALPK1Q96QP1 1244 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 ULBP2Q9BZM5 246 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 TXNIPQ9H3M7 391 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 CRLF2Q9HC73 371 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 OBP2BQ9NPH6 170 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 SLC17A5Q9NRA2 495 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms