RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 A0A1W2PPR1 153 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 RPL36A-HNRNPH2H7BZ11 118 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 RAF1P04049 648 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 F13BP05160 661 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 FUT4P22083 530 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 LOXP28300 417 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 GPR4P46093 362 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 SLC9A3P48764 834 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 ZNF83P51522 516 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 TBRG1Q3YBR2 411 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 HIKESHIQ53FT3 197 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 NCMAPQ5T1S8 102 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 LCN8Q6JVE9 175 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 ANKRD16Q6P6B7 361 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 PODNL1Q6PEZ8 512 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 LINGO2Q7L985 606 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 TSEN54Q7Z6J9 526 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 SLC7A13Q8TCU3 470 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 POP5Q969H6 163 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 ZNF566Q969W8 418 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 ZNF347Q96SE7 839 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 SEPHS2Q99611 448 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 LIME1Q9H400 295 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 POFUT2Q9Y2G5 429 aa16.21■□□□□ 0.19
PRPF40B-216ENST00000552301 ROS1P08922 2347 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 M0R1B8 84 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 GADD45GO95257 159 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 IGHG1P01857 330 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 SEMG1P04279 462 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 LSM11P83369 360 aaKnown RBP eCLIP16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 ARF1P84077 181 aaKnown RBP16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 BSPH1Q075Z2 132 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 TAF11Q15544 211 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 ANKDD1AQ495B1 522 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 ALG10Q5BKT4 473 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 TBPL2Q6SJ96 375 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 TMEM108Q6UXF1 575 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 OAFQ86UD1 273 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 MEX3DQ86XN8 651 aaKnown RBP16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 ZDHHC21Q8IVQ6 265 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 OR52J3Q8NH60 311 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 MOSPD2Q8NHP6 518 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 ASB9Q96DX5 294 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 SLC25A44Q96H78 314 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 CLPTM1LQ96KA5 538 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 IL1RAPQ9NPH3 570 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 NPAP1Q9NZP6 1156 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 AURKCQ9UQB9 309 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 HIF3AQ9Y2N7 669 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 CSMD1Q96PZ7 3565 aa16.2■□□□□ 0.18
PRPF40B-216ENST00000552301 TRAV27A0A087WT01 109 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 A0A096LPE4 126 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 A0A1W2PPZ6 126 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 ZNF99A8MXY4 864 aaPredicted RBP16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 MAKP20794 623 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 PAX7P23759 505 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 CLRN1P58418 232 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 TOP3AQ13472 1001 aaPredicted RBP16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 FAM98BQ52LJ0 330 aaKnown RBP16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 SEZ6L2Q6UXD5 910 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 NHLRC1Q6VVB1 395 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 C20orf204Q6ZNR8 217 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 WDR31Q8NA23 367 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 OR13C2Q8NGS9 318 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 OR51A7Q8NH64 312 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 BCL2L2Q92843 193 aaPredicted RBP16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 DHRS1Q96LJ7 313 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 C1QTNF6Q9BXI9 259 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 CCM2LQ9NUG4 571 aaPredicted RBP16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 GLTPQ9NZD2 209 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 TMCC3Q9ULS5 477 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 MGAT4BQ9UQ53 548 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 CADP27708 2225 aa16.19■□□□□ 0.18
PRPF40B-216ENST00000552301 TRBV4-1A0A0J9YWV2 114 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 DPRXA6NFQ7 191 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 HOXB1P14653 301 aaPredicted RBP16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 PTAFRP25105 342 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 CAPZA2P47755 286 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 RPS4XP62701 263 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 CHRNB3Q05901 458 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 LAPTM4AQ15012 233 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 ACKR1Q16570 336 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 PHYHD1Q5SRE7 291 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 ADAM5Q6NVV9 412 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 TMPRSS11FQ6ZWK6 438 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 OR4K5Q8NGD3 323 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 MAGEE2Q8TD90 523 aaPredicted RBP16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 ASB10Q8WXI3 467 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 AKAP1Q92667 903 aaKnown RBP eCLIP16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 FAM46AQ96IP4 442 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 BTBD10Q9BSF8 475 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 TMEM204Q9BSN7 226 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 MAGIXQ9H6Y5 334 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 MOV10Q9HCE1 1003 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 MYO9AB2RTY4 2548 aa16.18■□□□□ 0.18
PRPF40B-216ENST00000552301 NPIPB13A6NJU9 1138 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 NPIPB4C9JG80 1138 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 ABCD4O14678 606 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 HS3ST1O14792 307 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 ENTPD5O75356 428 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms