RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 NPIPB7O75200 414 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF432O94892 652 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 DBIP07108 87 aaKnown RBP5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 TFPTP0C1Z6 253 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 MYZAPP0CAP1 466 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 EGR1P18146 543 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 HNF1AP20823 631 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 AQP1P29972 269 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 HTR3AP46098 478 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 PTDSS1P48651 473 aaKnown RBP5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 CLK1P49759 484 aaKnown RBP5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 CDH15P55291 814 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 DSTNP60981 165 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 MAD2L1Q13257 205 aaPredicted RBP5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 STX3Q13277 289 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 RAB39AQ14964 217 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 MS4A18Q3C1V0 323 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 AP1ARQ63HQ0 302 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 WBP2NLQ6ICG8 309 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 FAHD2BQ6P2I3 314 aaPredicted RBP5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 TSPYL5Q86VY4 417 aaPredicted RBP5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 PEX5LQ8IYB4 626 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 LINC01356Q8N9X3 169 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 ICA1LQ8NDH6 482 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 C1orf162Q8NEQ5 155 aaPredicted RBP5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 NFKBIDQ8NI38 313 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 AENQ8WTP8 325 aaKnown RBP5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 PMM1Q92871 262 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 PPP1R14AQ96A00 147 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 FAHD2AQ96GK7 314 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 HRASLS5Q96KN8 279 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 MOGAT1Q96PD6 335 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 SH3GL3Q99963 347 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 KATNB1Q9BVA0 655 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 RAB1BQ9H0U4 201 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 MEAF6Q9HAF1 191 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 POLE3Q9NRF9 147 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 HIF1ANQ9NWT6 349 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 PRR13Q9NZ81 148 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF224Q9NZL3 707 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 DUSP13Q9UII6 198 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 BTNL2Q9UIR0 455 aa5.87□□□□□ -1.47
PRPF40B-214ENST00000551320 NOTCH1P46531 2555 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 DSPPQ9NZW4 1301 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 ARPC4-TTLL3A0A0A6YYG9 625 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 NDUFS8O00217 210 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 DNPH1O43598 174 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 SPRY1O43609 319 aaPredicted RBP5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 TRAF3IP2O43734 574 aaPredicted RBP5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 TPST2O60704 377 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 AHSA1O95433 338 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 ANP32DO95626 131 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 AGR2O95994 175 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 IGKV3-15P01624 115 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 TACSTD2P09758 323 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 CSF3P09919 207 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 NUDT17P0C025 328 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 CBR1P16152 277 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF43P17038 809 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 NR4A1P22736 598 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 GIFP27352 417 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 PPOXP50336 477 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 CHN2P52757 468 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 COPZ1P61923 177 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 CCL8P80075 99 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 MYBPC1Q00872 1141 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 POU3F1Q03052 451 aaPredicted RBP5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 C1DQ13901 141 aaKnown RBP5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 MELKQ14680 651 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 MFSD13AQ14CX5 517 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 EFNB3Q15768 340 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 SMU1Q2TAY7 513 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 LIN52Q52LA3 116 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF311Q5JNZ3 666 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 TMEM255AQ5JRV8 349 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 C6orf10Q5SRN2 563 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 LIPNQ5VXI9 398 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 WDR88Q6ZMY6 472 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF813Q6ZN06 617 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 SPATC1Q76KD6 591 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 THAP5Q7Z6K1 395 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 JAZF1Q86VZ6 243 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 RBM45Q8IUH3 476 aaKnown RBP5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 SKA3Q8IX90 412 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 TMEM123Q8N131 208 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF786Q8N393 782 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 GPR137CQ8N3F9 429 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 NATD1Q8N6N6 113 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 C10orf53Q8N6V4 93 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 LRRC17Q8N6Y2 441 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 VPS37AQ8NEZ2 397 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 SEMA6DQ8NFY4 1073 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 TRIM44Q96DX7 344 aaPredicted RBP5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF75AQ96N20 296 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 LRRC37BQ96QE4 947 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 SF3B5Q9BWJ5 86 aaKnown RBP5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 IKZF5Q9H5V7 419 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 TPT1P8Q9HAU6 139 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 ESM1Q9NQ30 184 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF275Q9NSD4 429 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms