RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 METTL6Q8TCB7 284 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 CNOT9Q92600 299 aaKnown RBP11.12□□□□□ -0.63
SNRPF-203ENST00000551316 CDKL2Q92772 493 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 ZG16BQ96DA0 208 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 CCDC126Q96EE4 140 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 OR2M2Q96R28 347 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 PRPF18Q99633 342 aaKnown RBP11.12□□□□□ -0.63
SNRPF-203ENST00000551316 NUDT16L1Q9BRJ7 211 aaKnown RBP11.12□□□□□ -0.63
SNRPF-203ENST00000551316 C1QTNF3Q9BXJ4 246 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 PIF1Q9H611 641 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 LZTFL1Q9NQ48 299 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 SLCO1C1Q9NYB5 712 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 FBLN5Q9UBX5 448 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 VPREB3Q9UKI3 123 aa11.12□□□□□ -0.63
SNRPF-203ENST00000551316 SCN2BO60939 215 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 RAB36O95755 333 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 IGHV3-13P01766 116 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 F13BP05160 661 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 CFHR2P36980 270 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 POLR2HP52434 150 aaKnown RBP11.11□□□□□ -0.63
SNRPF-203ENST00000551316 SLC3A1Q07837 685 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 EGFEM1PQ0D2K5 195 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 FUT5Q11128 374 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 ILF2Q12905 390 aaKnown RBP11.11□□□□□ -0.63
SNRPF-203ENST00000551316 PDE7AQ13946 482 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 MFSD13AQ14CX5 517 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 CARD17Q5XLA6 110 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 GPRIN3Q6ZVF9 776 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 EIF3MQ7L2H7 374 aaKnown RBP11.11□□□□□ -0.63
SNRPF-203ENST00000551316 KLBQ86Z14 1044 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 PDZD9Q8IXQ8 264 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 GPR137CQ8N3F9 429 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 ZNF283Q8N7M2 679 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 ANKK1Q8NFD2 765 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 ZNF519Q8TB69 540 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 ZNF382Q96SR6 550 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 ASCL2Q99929 193 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 TRIM31Q9BZY9 425 aa11.11□□□□□ -0.63
SNRPF-203ENST00000551316 CCDC189A1A4V9 331 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 PGRMC1O00264 195 aaKnown RBP11.1□□□□□ -0.63
SNRPF-203ENST00000551316 OPN1SWP03999 348 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 RPS2P15880 293 aaKnown RBP11.1□□□□□ -0.63
SNRPF-203ENST00000551316 CD33P20138 364 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 ETV4P43268 484 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 COX20Q5RI15 118 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 CLEC4FQ8N1N0 589 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 TMEM151AQ8N4L1 468 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 SLC30A7Q8NEW0 376 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 WFDC9Q8NEX5 89 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
SNRPF-203ENST00000551316 PPCDCQ96CD2 204 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 MRRFQ96E11 262 aaKnown RBP11.1□□□□□ -0.63
SNRPF-203ENST00000551316 TSSK3Q96PN8 268 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 TMEM237Q96Q45 408 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 ARHGDIGQ99819 225 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 ZNF350Q9GZX5 532 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 PPA2Q9H2U2 334 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 MSL2Q9HCI7 577 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 EXD2Q9NVH0 621 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 GPR160Q9UJ42 338 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 USH1CQ9Y6N9 552 aa11.1□□□□□ -0.63
SNRPF-203ENST00000551316 SLC22A23A1A5C7 686 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 MFN2O95140 757 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 SERPINA5P05154 406 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 VSIG10L2P0DP72 767 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 PNMTP11086 282 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 SDC1P18827 310 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 SLC6A2P23975 617 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 PMS2P3Q13401 168 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 KIAA0040Q15053 153 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 TEX35Q5T0J7 233 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 TYW3Q6IPR3 259 aaKnown RBP11.09□□□□□ -0.63
SNRPF-203ENST00000551316 KLC3Q6P597 504 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 MEPCEQ7L2J0 689 aaKnown RBP11.09□□□□□ -0.63
SNRPF-203ENST00000551316 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 LRRC8AQ8IWT6 810 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 SKA3Q8IX90 412 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 CCDC36Q8IYA8 594 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 PYROXD1Q8WU10 500 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 ZNF764Q96H86 408 aaPredicted RBP11.09□□□□□ -0.63
SNRPF-203ENST00000551316 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
SNRPF-203ENST00000551316 TNFRSF12AQ9NP84 129 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 SH3BP4Q9P0V3 963 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 ZNRD1Q9P1U0 126 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 CCL27Q9Y4X3 112 aa11.09□□□□□ -0.63
SNRPF-203ENST00000551316 IGHV1-69DA0A0B4J2H0 117 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 FTCDNL1E5RQL4 147 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 POC1B-GALNT4F8VUJ3 575 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 TBX19O60806 448 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 SMIM24O75264 130 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 IGHV1-69P01742 117 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 ADH4P08319 380 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 NHLRC4P0CG21 123 aaPredicted RBP11.08□□□□□ -0.64
SNRPF-203ENST00000551316 FKBP2P26885 142 aaKnown RBP11.08□□□□□ -0.64
SNRPF-203ENST00000551316 PRB3Q04118 309 aaPredicted RBP11.08□□□□□ -0.64
SNRPF-203ENST00000551316 ARHGAP11BQ3KRB8 267 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 ZNF101Q8IZC7 436 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 GALNT4Q8N4A0 578 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 C10orf82Q8WW14 230 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 GATAD2BQ8WXI9 593 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms